Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq312 98.7 8e-16 >seq312 Length=1469985 Score = 98.7 bits (108), Expect = 8e-16 Identities = 143/198 (72%), Gaps = 8/198 (4%) Strand=Plus/Minus Query 108448 CAGAACACCATCCCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACG 108507 ||||| ||||| || ||||||| ||| || |||| |||||||||| ||| || ||| Sbjct 399885 CAGAATTCCATCTATCAATGGGTGCGCGACCATCGGGTGCACCACAAGTTCTCGGAGACG 399826 Query 108508 ACGGCCGACCCACACAAC-GCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCAT 108566 || || || |||||| | | | |||| |||| ||||||||||| || |||||||| Sbjct 399825 GACGCGGATCCGCACAACAGTCGTC-GGGGCTTCTTCTTCTCGCACGTCGGCTGGCTCAT 399767 Query 108567 GATGACCAAGGACCCCGACGTGATCTCGGCC---GGTCGAAAAATGGACATGACGGACAT 108623 | ||| ||| |||| || ||| | |||| || | || || ||||||| ||||| Sbjct 399766 GCTGAAAAAGCACCCGGAGGTGCT---GGCCAAGGGCCAGAAGATCGACATGAGCGACAT 399710 Query 108624 ATACTCCGATCCGGTGGT 108641 | | ||||||||||| Sbjct 399709 CCTCGCGGATCCGGTGGT 399692 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/193 (72%), Gaps = 6/193 (3%) Strand=Plus/Minus Query 108449 AGAACACCATCCCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGA 108508 ||||| | |||| | |||||| || || |||| || ||||||| ||| || ||| Sbjct 394949 AGAACTCGATCCACGAATGGGTGAGGGACCATCGGGTGCATCACAAGTTCTCGGAGACGG 394890 Query 108509 CGGCCGACCCACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGA 108568 ||||| || |||||| ||| | || |||| ||||||||||| || |||||||||| Sbjct 394889 ACGCCGATCCGCACAACAGCAAGCGCGGCTTCTTCTTCTCGCACGTCGGCTGGCTCATGA 394830 Query 108569 TGACCAAGGACCCCGACGTGATCTCGGCCGGTCGAAAA---ATGGACATGACGGACATAT 108625 ||| ||| | |||||||| | || || | ||||| || ||||||| ||||| Sbjct 394829 TGAAGAAGCATCCCGACGTCA--TCAGCAAG-GGAAAACTGATCGACATGAGCGACATCG 394773 Query 108626 ACTCCGATCCGGT 108638 | ||||||| || Sbjct 394772 AGGCCGATCCCGT 394760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381771138930408