Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq89 136 4e-27 seq222 82.4 8e-11 >seq89 Length=3244750 Score = 136 bits (150), Expect = 4e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| |||| | |||||| |||||||| | | |||||||||||||| |||||||| Sbjct 1691437 GCCTCCTCTAAGACGCAATACTAAATGCAGTGTCGACTCCTTTTGAATATTGTAGTCTGA 1691496 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || ||| || ||| || || ||||| |||| | || ||||||||||| || || || Sbjct 1691497 CAAAGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAAATGAGACGCTGTTGATCTGGGGG 1691556 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||||||||| ||| |||| | || | | ||| | ||||||| | || | Sbjct 1691557 AATTCCTTCTTTGTC-TTGAATTTTGGCCTTCACGTTTTCAATTGTGTCGGAGGCTTCGA 1691615 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | |||||||| ||||||||||| |||||||| ||||| Sbjct 1691616 CCTCAAGTGTGATGGTTTTACCTGTCAGAGTTTTGACAAAAATTTGCAT 1691664 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||||| || ||||| | | |||||||||| |||||||| || || Sbjct 1690526 CCACCACGCAGACGCAGCACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAATCTGAG 1690585 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||| | || ||||| | | | ||||||||||||||||| ||||| Sbjct 1690586 AGTGTACGTCCATCCTCCAACTGCTTACCAGCAAAAATTAGACGCTGTTGGTCTGGAGGG 1690645 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||| ||||| |||||| ||| | | || | ||| || | | || ||| Sbjct 1690646 ATACCTTCCTTGTCCTGGATTTTGGCTTTCACATTCTCAATGGTATCAGAAGCTTCAACC 1690705 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || |||||||| ||||| ||||||||||||||||| Sbjct 1690706 TCCAAAGTGATGGTCTTACCAGTAAGAGTCTTTACAAAAATCTGCAT 1690752 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||||| ||| || |||||||| | ||||||| || ||||| |||||||| Sbjct 1690754 CCACCTCGCAGACGTAATACTAAATGCAAAGTTGACTCTTTCTGAATATTGTAGTCAGAT 1690813 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||||| |||||||| || | | |||| |||||||||||||| || || Sbjct 1690814 AGAGTGCGACCATCCTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGGTCTGGTGGG 1690873 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || ||||| || ||| | || | ||| | | ||| | ||||| | | || || Sbjct 1690874 ATTCCCTCTTTATC-TTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGCTTCAAC 1690932 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | || || ||||||||||| || ||||||||||||||| Sbjct 1690933 CTCCAATGTGATAGTCTTGCCAGTCAGAGTCTTGACAAAAATCTGCATG 1690981 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| || ||||| || | | ||||| ||||| || |||||||| Sbjct 1689592 CCACCCCGGAGACGTAATACTAAGTGAAGTGTAGACTCTTTTTGGATATTGTAGTCTGAT 1689651 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| ||||| ||||| || || | | | || | |||||| ||||| ||||| Sbjct 1689652 AGAGTACGACCATCCTCAAGTTGCTTGCCAGCAAAAATCAAACGCTGCTGGTCTGGAGGG 1689711 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||| ||||| ||| || ||||| | || | ||| || | | || ||| Sbjct 1689712 ATACCTTCCTTGTCCTGGATCTTGGCTTTTACATTCTCAATGGTATCAGAAGCTTCAACC 1689771 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || |||||||| ||||| || |||||||||||||| Sbjct 1689772 TCCAATGTGATGGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 1689818 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||||| ||| || || | ||||||| ||||| ||||| || || Sbjct 1690981 GCCACCACGAAGACGCAGAACCAAGTGAAGAGTTGACTCTTTTTGGATGTTATAATCTGA 1691040 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || || || || | ||||||||| | | | |||| |||||| ||||| ||||| Sbjct 1691041 CAATGTGCGACCATCTTCCAATTGTTTACCAGCAAAAATTAAACGCTGCTGGTCTGGAGG 1691100 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||||||||| ||| |||| | ||| | | ||| | ||||| | | || | Sbjct 1691101 GATGCCTTCTTTGTC-CTGAATTTTAGCTTTCACATTTTCAATTGTGTCAGATGCTTCGA 1691159 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || | || | ||||| ||||| || || || |||||||| ||||| Sbjct 1691160 CTTCAAGAGTTATAGTTTTTCCAGTGAGGGTCTTGACAAAAATTTGCAT 1691208 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||||| ||| || || | | |||||||| || ||||||||||| | Sbjct 1689820 CCACCACGCAGACGCAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCAGAC 1689879 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || || |||||||| | | |||| |||||||| || || ||||| Sbjct 1689880 AGTGTGCGTCCATCTTCCAGCTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGA 1689939 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||||||||| ||| | || | || | | ||| | ||||||| | ||||| Sbjct 1689940 ATGCCTTCTTTGTC-TTGAATCTTGGCCTTGACATTTTCAATAGTGTCGGAAGCTTCCAC 1689998 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || |||| || || ||||| |||||||| Sbjct 1689999 TTCCAAGGTGATGGTCTTTCCTGTCAATGTCTTGACAAAGATCTGCAT 1690046 Score = 93.3 bits (102), Expect = 4e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| |||||||| || || || || || || ||||| || || || | | Sbjct 1691927 GATTCCTTCTGAATGTTATAATCAGACAAGGTGCGTCCATCTTCGAGCTGCTTTCCTGCA 1691986 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | | ||| ||||| || || || || |||||||| ||| | |||| |||| Sbjct 1691987 AAGATCAATCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT-TGAATCTTTGCCTTAAC 1692045 Query 138541 -TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | ||| | |||||||| | ||| ||||| | || | |||||||||||||| || || Sbjct 1692046 ATTTTCAATGGTGTCGGATGCCTCGACCTCCAATGTGATGGTTTTACCAGTCAGCGTCTT 1692105 Query 138600 TACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 1692106 CACAAAGATCTGCAT 1692120 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | || || || | | | ||||| |||||||| || ||||| | Sbjct 1691210 CCACCACGCAGACGGAGTACCAAGTGGAGGGTGGACTCTTTTTGAATATTATAGTCCGAC 1691269 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || | || ||||| | | | |||| |||||| || || || || Sbjct 1691270 AATGTGCGACCATCTTCCAACTGCTTACCAGCAAAAATTAAACGCTGCTGATCTGGTGGG 1691329 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||||||||| ||| || || | | ||| | ||||| | | ||| || Sbjct 1691330 ATTCCTTCTTTGTCTTGGATCTTGGCCTTGACATTTTCAATTGTGTCTGAGGCCTCGACT 1691389 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 || | || | ||||||||||||| ||||| ||||| || |||||| || Sbjct 1691390 TCCAAAGTAATGGTTTTACCAGTCAATGTTTTAACAAAGATTTGCATGCCT 1691440 >seq222 Length=7060343 Score = 82.4 bits (90), Expect = 8e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 || || | ||||||||||| | |||| | | || || || ||||| || |||||||| Sbjct 1553894 TCTTCCAATTGTTTACCGGCAAAGATCAATCTTTGCTGATCTGGAGGGATTCCTTCTTTA 1553953 Query 138520 TCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGC 138579 || |||||| || | | ||| | ||||| | | ||| ||||| | || | Sbjct 1553954 TCCTGGATTTTAGCCTTGACATTTTCAATAGTGTCAGAGGCCTCAACCTCCAAGGTGATG 1554013 Query 138580 GTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || |||||||||| |||||| |||||||||||||| Sbjct 1554014 GTCTTACCAGTCAAAGTTTTAACAAAAATCTGCAT 1554048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496260185429040