Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq89 125 6e-24 seq256 123 2e-23 seq123 109 5e-19 seq336 100 3e-16 seq222 93.3 4e-14 seq56 84.2 2e-11 >seq89 Length=3244750 Score = 125 bits (138), Expect = 6e-24 Identities = 152/205 (74%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGTCCAATT 45195 || || ||||| || |||||||| |||||||| |||| | | || ||| ||||||| Sbjct 1691006 TGAAGAGTTGACTCTTTTTGGATGTTATAATC--TGACAATGTGCGACCATCTTCCAATT 1691063 Query 45196 GTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTT 45255 |||| || || | || || || |||||||| || || ||||||||||| || ||||||| Sbjct 1691064 GTTTACCAGCAAAAATTAAACGCTGCTGGTCTGGAGGGATGCCTTCTTTGTCCTGAATTT 1691123 Query 45256 TTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315 | ||| | ||| | ||||| || | |||||||| ||||| | ||||| || | Sbjct 1691124 TAGCTTTCACATTTTCAATTGTGTCAGATGCTTCGACTTCAAGAGTTATAGTTTTTCCAG 1691183 Query 45316 TTAGAGTTTTTACAAAAATTTGCAT 45340 | || || || |||||||||||||| Sbjct 1691184 TGAGGGTCTTGACAAAAATTTGCAT 1691208 Score = 114 bits (126), Expect = 1e-20 Identities = 153/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGT 45189 || |||||||| || ||||| || || || || ||||| |||| | | | ||| | Sbjct 1691684 ACAAGATGCAGTGTGGATTCTTTCTGAATGTTGTAATC--TGACAGAGTGCGTCCATCTT 1691741 Query 45190 CCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTT 45249 ||||||||||||| || | ||||||| ||||| || || ||||| || || ||||||| Sbjct 1691742 CCAATTGTTTTCCAGCAAAGATCAATCTCTGCTGATCTGGTGGAATTCCCTCCTTATCTT 1691801 Query 45250 GAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309 ||||||| || | || | || || |||||||| || || || |||| || | Sbjct 1691802 GAATTTTGGCCTTAACATTCTCAATAGTATCTGAAGACTCAACCTCAAGGGTAATGGTCT 1691861 Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||| || ||||| || ||||| |||||||| Sbjct 1691862 TGCCAGTCAGAGTCTTGACAAAGATTTGCAT 1691892 Score = 111 bits (122), Expect = 1e-19 Identities = 165/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| | || | ||| |||| |||||| || || |||||||| ||||| || || Sbjct 1691435 ATGCCTCCTCTAAGACGCAATACTAAATGCAGTGTCGACTCCTTTTGAATATTGTAGTC- 1691493 Query 45171 CTGACGGTTTTAGAA--TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 |||| | || || || | |||||||| ||| | || | || || || || | Sbjct 1691494 -TGACAAAGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAAATGAGACGCTGTTGATCTG 1691552 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | ||||| |||||||| ||||||||||| || | ||| | |||||||| | | Sbjct 1691553 GGGGAATTCCTTCTTTGTCTTGAATTTTGGCCTTCACGTTTTCAATTGTGTCGGAGGCTT 1691612 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||| || || || | ||||| || || |||||||| |||||||||||||| Sbjct 1691613 CGACCTCAAGTGTGATGGTTTTACCTGTCAGAGTTTTGACAAAAATTTGCAT 1691664 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || || | || |||| ||||| ||||| || || || ||||| || || Sbjct 1690751 ATACCACCTCGCAGACGTAATACTAAATGCAAAGTTGACTCTTTCTGAATATTGTAGTCA 1690810 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | ||| || | |||||| || || | || | || || ||||| || Sbjct 1690811 GATAGAGTGCGACCATCCTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGGTCTGGT 1690870 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || || |||||||||||||| || ||||| ||| | ||||| |||| || Sbjct 1690871 GGGATTCCCTCTTTATCTTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGCTTCA 1690930 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | || | || ||||| || ||||| || |||||||| ||||| Sbjct 1690931 ACCTCCAATGTGATAGTCTTGCCAGTCAGAGTCTTGACAAAAATCTGCAT 1690980 >seq256 Length=3517054 Score = 123 bits (136), Expect = 2e-23 Identities = 155/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGT 45189 |||| ||| || || |||||||| || ||||| |||||| ||| | | | ||| | Sbjct 130803 ACTAAATGAAGGGTAGATTCCTTCTGAATATTGTAATCG--GACAATGTACGTCCATCTT 130860 Query 45190 CCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTT 45249 ||||||||||||| ||| | ||||||| ||||||||| || ||||| ||||| ||||||| Sbjct 130861 CCAATTGTTTTCCGGCGAAGATCAATCTTTGCTGGTCTGGAGGAATTCCTTCCTTATCTT 130920 Query 45250 GAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309 | ||||| |||| ||| | | |||| | | || || || || || | |||| Sbjct 130921 GGATTTTGGCCTTGACATTTTCAATGCTGTCAGCCGCATCAACCTCAAGGGTGATGGTTT 130980 Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || || || ||||| ||||| |||||||| Sbjct 130981 TTCCTGTGAGTGTTTTCACAAAGATTTGCAT 131011 >seq123 Length=3260300 Score = 109 bits (120), Expect = 5e-19 Identities = 139/189 (74%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 45153 TTTTGGATATTATAATCGCTGACG-GTTTTAGAATCGTCCAATTGTTTTCCTGCGTATAT 45211 ||||| ||||||||||| ||| | || | ||| ||||||||||| || ||| | || Sbjct 712127 TTTTGTATATTATAATCT-TGAAGAGTGCGACCATCTTCCAATTGTTTACCAGCGAAGAT 712185 Query 45212 CAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTC 45271 ||| | ||||| || || ||||| || ||||| ||||| ||||| ||||| ||| Sbjct 712186 CAACCTCTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGGATTTTAGCTTTGACATTTTC 712245 Query 45272 TACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAA 45331 | || || |||| || ||||| | ||||| || ||||| |||| |||||| ||||| Sbjct 712246 AATAGTATCAGAAGCTTCAACTTCCAAAGTAATGGTCTTGCCAGTTAAAGTTTTGACAAA 712305 Query 45332 AATTTGCAT 45340 || ||||| Sbjct 712306 GATCTGCAT 712314 >seq336 Length=3726090 Score = 100 bits (110), Expect = 3e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 45153 TTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATC 45212 |||||||| || ||||| || || | ||| || ||||||||||| || | ||| Sbjct 1528382 TTTTGGATGTTGTAATCTTGGAGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAGATC 1528441 Query 45213 AATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCT 45272 |||| |||||| ||||| ||||| ||||| |||||||| ||||| |||| ||| Sbjct 1528442 AATCTTTGCTGATCCGGAGGAATTCCTTCCTTATCTTGGATTTTGGCCTTGACATTTTCA 1528501 Query 45273 ACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAA 45332 | || || || | ||||| || | |||| ||||| || || | |||||| ||||| Sbjct 1528502 ATAGTATCAGAGGCTTCGACCTCCAAGGTAATAGTTTTACCAGTCAAAGTTTTGACAAAG 1528561 Query 45333 ATTTGCAT 45340 || ||||| Sbjct 1528562 ATCTGCAT 1528569 >seq222 Length=7060343 Score = 93.3 bits (102), Expect = 4e-14 Identities = 136/191 (71%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 45151 CCTTT-TGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209 ||||| |||||||| ||||| | ||| | ||| ||||||||||| || || | Sbjct 1553858 CCTTTCTGGATATTGTAATCTTGAAGGGTACGACCATCTTCCAATTGTTTACCGGCAAAG 1553917 Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 ||||||| |||||| || || || || ||||||||||| || ||||| |||| | Sbjct 1553918 ATCAATCTTTGCTGATCTGGAGGGATTCCTTCTTTATCCTGGATTTTAGCCTTGACATTT 1553977 Query 45270 TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACA 45329 || | ||||| || | ||| || || | || | || || || || | |||||| ||| Sbjct 1553978 TCAATAGTGTCAGAGGCCTCAACCTCCAAGGTGATGGTCTTACCAGTCAAAGTTTTAACA 1554037 Query 45330 AAAATTTGCAT 45340 ||||| ||||| Sbjct 1554038 AAAATCTGCAT 1554048 >seq56 Length=4197193 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 123598 CACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCA 123657 ||||||| ||||| ||||| || |||||| | |||||||| || || || | ||| ||| Sbjct 1120896 CACAAGTAGAAACTGGAACACCATACATGTTATACAAAGATGCTTGTAATCGTAAATCCA 1120955 Query 123658 ATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACA 123717 |||| || ||||| ||||| | | |||||||| | || | || || | | ||| Sbjct 1120956 ATCAACAAAATTTGGGCACAATCAGAAGTAGTAATTTATGTACTGAGGTTGTACAGTACT 1121015 Query 123718 GCGATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTCGATT 123758 | ||| ||||||| || ||||||||||| || ||| Sbjct 1121016 CATCACCTGATGAAGTGGCAGTTTGTAATTTGGCATCAATT 1121056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452001182935720