Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq89 149 1e-30 seq256 104 6e-17 >seq89 Length=3244750 Score = 149 bits (164), Expect = 1e-30 Identities = 153/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || |||||||||||||| | |||||||| | |||||| | || ||||| ||||| Sbjct 1691462 TGCAGTGTCGACTCCTTTTGAATATTGTAGTCTGACAAAGTGCGACCGTCTTCAAGCTGT 1691521 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 ||||||||||| ||||||||||| || || || |||||||||| || ||||| || Sbjct 1691522 TTTCCGGCGAAAATGAGACGCTGTTGATCTGGGGGAATTCCTTCTTTGTCTTGAATTTTG 1691581 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||||||| ||| | ||||| | | ||| || || | ||||| || ||||| || Sbjct 1691582 GCCTTCACGTTTTCAATTGTGTCGGAGGCTTCGACCTCAAGTGTGATGGTTTTACCTGTC 1691641 Query 199607 AGAGTTTTCACAAAAATTTG 199626 |||||||| ||||||||||| Sbjct 1691642 AGAGTTTTGACAAAAATTTG 1691661 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || | ||| |||||||||||||| |||| ||||||||||| || || Sbjct 1689826 CGCAGACGCAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCAGACAGTGTG 1689885 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||||||||| || || || ||||| ||||||||||| || ||| ||| ||| Sbjct 1689886 CGTCCATCTTCCAGCTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGAATGCCT 1689945 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || |||||||| ||| || ||| | ||||| | | ||| || ||||| Sbjct 1689946 TCTTTGTCTTGAATCTTGGCCTTGACATTTTCAATAGTGTCGGAAGCTTCCACTTCCAAG 1690005 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || | || || ||||| || || Sbjct 1690006 GTGATGGTCTTTCCTGTCAATGTCTTGACAAAGATCTG 1690043 Score = 138 bits (152), Expect = 3e-27 Identities = 164/222 (74%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| || ||||||||||| || || ||||| || | ||| || |||| ||| || | ||| Sbjct 1691905 TCTGAGTACAAGGTGGAGTGTGGATTCCTTCTGAATGTTATAATCAGACAAGGTGCGTCC 1691964 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| ||||||||||| || ||||| | | ||||||||| || || || ||| Sbjct 1691965 ATCTTCGAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGGTCTGGGGGGATGCCCTCTTT 1692024 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || ||||||||| ||| || ||| | |||||| | || || || ||||| ||||| Sbjct 1692025 GTCTTGAATCTTTGCCTTAACATTTTCAATGGTGTCGGATGCCTCGACCTCCAATGTGAT 1692084 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 || ||||| || || || |||||||| || || |||||| Sbjct 1692085 GGTTTTACCAGTCAGCGTCTTCACAAAGATCTG---CATTTT 1692123 Score = 122 bits (134), Expect = 2e-22 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||| || | ||| ||||| ||||| ||||||| ||| || || | ||| || Sbjct 1690988 CGAAGACGCAGAACCAAGTGAAGAGTTGACTCTTTTTGGATGTTATAATCTGACAATGTG 1691047 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||| || || || || || || | |||||||||||| ||| || ||| Sbjct 1691048 CGACCATCTTCCAATTGTTTACCAGCAAAAATTAAACGCTGCTGGTCTGGAGGGATGCCT 1691107 Query 199529 TCTCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 ||| |||||||| ||| || ||||| ||| | ||||| | || ||| || || | Sbjct 1691108 TCTTTGTCCTGAAT-TTTAGCTTTCACATTTTCAATTGTGTCAGATGCTTCGACTTCAAG 1691166 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| || || ||||||||||| Sbjct 1691167 AGTTATAGTTTTTCCAGTGAGGGTCTTGACAAAAATTTG 1691205 Score = 105 bits (116), Expect = 2e-17 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| || || ||||| ||||||| |||||||| | | ||| | ||||| || || || Sbjct 1689615 GTGAAGTGTAGACTCTTTTTGGATATTGTAGTCTGATAGAGTACGACCATCCTCAAGTTG 1689674 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||| || || || || | |||||||||||| ||| || ||||| ||||| ||||| Sbjct 1689675 CTTGCCAGCAAAAATCAAACGCTGCTGGTCTGGAGGGATACCTTCCTTGTCCTGGATCTT 1689734 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 || || || | ||| || | | ||| || ||||| ||||| |||||||| || Sbjct 1689735 GGCTTTTACATTCTCAATGGTATCAGAAGCTTCAACCTCCAATGTGATGGTCTTACCAGT 1689794 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 ||||| || |||||||| || Sbjct 1689795 AAGAGTCTTAACAAAAATCTG 1689815 Score = 104 bits (114), Expect = 6e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 199432 AGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 199491 ||| ||||| || || | |||||||||| | ||| | ||||| || || || || || Sbjct 1690783 AGTTGACTCTTTCTGAATATTGTAGTCAGATAGAGTGCGACCATCCTCAAGTTGTTTGCC 1690842 Query 199492 GGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT 199551 || |||||||||||||| ||||| || ||||| ||| || |||||||| || Sbjct 1690843 AGCAAAGATGAGACGCTGTTGGTCTGGTGGGATTCCCTCTTTATCTTGAATCTTAGCTTT 1690902 Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611 || ||| | ||||| | | ||| || ||||| ||||| ||||| || || ||||| Sbjct 1690903 GACATTTTCAATAGTGTCAGAAGCTTCAACCTCCAATGTGATAGTCTTGCCAGTCAGAGT 1690962 Query 199612 TTTCACAAAAATTTG 199626 || |||||||| || Sbjct 1690963 CTTGACAAAAATCTG 1690977 >seq256 Length=3517054 Score = 104 bits (114), Expect = 6e-17 Identities = 154/218 (71%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | || || || || ||||| || | ||||| || | ||| || | ||||||| Sbjct 130800 AGGACTAAATGAAGGGTAGATTCCTTCTGAATATTGTAATCGGACAATGTACGTCCATCT 130859 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| || |||||||||||||| | | |||||||| ||| ||||||||| || Sbjct 130860 TCCAATTGTTTTCCGGCGAAGATCAATCTTTGCTGGTCTGGAGGAATTCCTTCCTTATCT 130919 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || || ||| || ||| | | |||| | | || || || | ||||| || Sbjct 130920 TGGATTTTGGCCTTGACATTTTCAATGCTGTCAGCCGCATCAACCTCAAGGGTGATGGTT 130979 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 || || ||||| ||||||||||| ||||| |||||| Sbjct 130980 TTTCCTGTGAGTGTTTTCACAAAGATTTG---CATTTT 131014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178916207538919