Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq89 120 3e-22 seq256 82.4 9e-11 >seq89 Length=3244750 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||||||||| | |||||| || | ||||| ||| ||||||||| ||||||||||| | Sbjct 1691436 TGCCTCCTCTAAGACGCAATACTAAATGCAGTGTCGACTCCTTTTGAATATTGTAGTCTG 1691495 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | | |||||| |||| || ||||| || |||||||| || | ||||| || || | | Sbjct 1691496 ACAAAGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAAATGAGACGCTGTTGATCTGGGG 1691555 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | | || ||||| || || ||| | | | | |||||| | ||| | Sbjct 1691556 GAATTCCTTCTTTGTCTTGAATTTTGGCCTTCACGTTTTCAATTGTGTCGGAGGCTTCGA 1691615 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct 1691616 CCTCAAGTGTGATGGTTTTACCTGTCAGAGTTTTGACAAAAATTTGCAT 1691664 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| || || | || | |||| ||| ||||||||||||||||| |||||||| || | Sbjct 1689603 ACGTAATACTAAGTGAAGTGTAGACTCTTTTTGGATATTGTAGTCTGATAGAGTACGACC 1689662 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || || |||||||| || || ||||| ||||||||||| | || | | ||||| Sbjct 1689663 ATCCTCAAGTTGCTTGCCAGCAAAAATCAAACGCTGCTGGTCTGGAGGGATACCTTCCTT 1689722 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| |||||| || | || | | || || | ||| || |||| ||||| Sbjct 1689723 GTCCTGGATCTTGGCTTTTACATTCTCAATGGTATCAGAAGCTTCAACCTCCAATGTGAT 1689782 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || || || || || |||||||| || ||||| Sbjct 1689783 GGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 1689818 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| || || || || || || | ||||| | || ||||||||||| || || || Sbjct 1691930 TCCTTCTGAATGTTATAATCAGACAAGGTGCGTCCATCTTCGAGCTGCTTTCCTGCAAAG 1691989 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| | ||||||||| | || | || ||| ||||| ||||| ||| | | Sbjct 1691990 ATCAATCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGAATCTTTGCCTTAACATTT 1692049 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||| | || || |||| ||||||||||| || |||||||| || ||| Sbjct 1692050 TCAATGGTGTCGGATGCCTCGACCTCCAATGTGATGGTTTTACCAGTCAGCGTCTTCACA 1692109 Query 46583 AAGATTTGCATTTT 46596 ||||| |||||||| Sbjct 1692110 AAGATCTGCATTTT 1692123 Score = 86.0 bits (94), Expect = 7e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || |||| | ||| || || | |||||| || ||| || || ||||||||||| ||| Sbjct 1690754 CCACCTCGCAGACGTAATACTAAATGCAAAGTTGACTCTTTCTGAATATTGTAGTCAGAT 1690813 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 |||||||| | || || || || ||||| || || || | ||||| ||||| | || Sbjct 1690814 AGAGTGCGACCATCCTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGGTCTGGTGGG 1690873 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | ||| || || ||||| |||| | | | ||||| | ||| || Sbjct 1690874 ATTCCCTCTTTATCTTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGCTTCAACC 1690933 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| ||||| || ||||| ||||| || || ||||| || ||||| Sbjct 1690934 TCCAATGTGATAGTCTTGCCAGTCAGAGTCTTGACAAAAATCTGCAT 1690980 Score = 86.0 bits (94), Expect = 7e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| ||||| ||||| ||||| || | ||||| | || || | |||||| || || || Sbjct 1691245 CTCTTTTTGAATATTATAGTCCGACAATGTGCGACCATCTTCCAACTGCTTACCAGCAAA 1691304 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || || |||||||| || | || | | || ||||| |||||| ||||| | Sbjct 1691305 AATTAAACGCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGGATCTTGGCCTTGACATT 1691364 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| | || || |||| || |||||||| || |||| |||||||| Sbjct 1691365 TTCAATTGTGTCTGAGGCCTCGACTTCCAAAGTAATGGTTTTACCAGTCAATGTTTTAAC 1691424 Query 46582 AAAGATTTGCAT 46593 |||||||||||| Sbjct 1691425 AAAGATTTGCAT 1691436 >seq256 Length=3517054 Score = 82.4 bits (90), Expect = 9e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| || |||||||| ||||| | || || | || || | || || |||||||| Sbjct 130821 TCCTTCTGAATATTGTAATCGGACAATGTACGTCCATCTTCCAATTGTTTTCCGGCGAAG 130880 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| | |||||||| | || | | ||||| || ||| || ||||| | Sbjct 130881 ATCAATCTTTGCTGGTCTGGAGGAATTCCTTCCTTATCTTGGATTTTGGCCTTGACATTT 130940 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||| || || || || | ||||||||||| || || || ||||| ||| Sbjct 130941 TCAATGCTGTCAGCCGCATCAACCTCAAGGGTGATGGTTTTTCCTGTGAGTGTTTTCACA 131000 Query 46583 AAGATTTGCATTTTG 46597 ||||||||||||||| Sbjct 131001 AAGATTTGCATTTTG 131015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565235877623640