Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq89 132 3e-26 seq123 95.1 8e-15 >seq89 Length=3244750 Score = 132 bits (146), Expect = 3e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || || |||| ||| |||||||| || | ||| |||||||| |||||||| || | | Sbjct 1691210 CCACCACGCAGACGGAGTACCAAGTGGAGGGTGGACTCTTTTTGAATATTATAGTCCGAC 1691269 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 || ||| |||| ||||| || || || |||||||||||||||||||||| | || Sbjct 1691270 AATGTGCGACCATCTTCCAACTGCTTACCAGCAAAAATTAAACGCTGCTGATCTGGTGGG 1691329 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | ||||||||||| || || || | | | | |||||||| | || || Sbjct 1691330 ATTCCTTCTTTGTCTTGGATCTTGGCCTTGACATTTTCAATTGTGTCTGAGGCCTCGACT 1691389 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 ||||||||||| |||||||| || || ||||| || ||||| |||||| Sbjct 1691390 TCCAAAGTAATGGTTTTACCAGTCAATGTTTTAACAAAGATTTGCATG 1691437 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551 ||| || || | |||||| ||||| || | ||| |||||||| || |||||||| | Sbjct 1690981 GCCACCACGAAGACGCAGAACCAAGTGAAGAGTTGACTCTTTTTGGATGTTATAATCTGA 1691040 Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611 ||| ||| |||| ||||||||||| || ||||||||||||||||||| || | || Sbjct 1691041 CAATGTGCGACCATCTTCCAATTGTTTACCAGCAAAAATTAAACGCTGCTGGTCTGGAGG 1691100 Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCAC 39671 | |||||||||||| ||||| ||| | | | | |||||| | ||| || Sbjct 1691101 GATGCCTTCTTTGTCCTGAATTTTAGCTTTCACATTTTCAATTGTGTCAGATGCTTCGAC 1691160 Query 39672 GTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || | ||| || ||||| || || | || || || || || ||||| Sbjct 1691161 TTCAAGAGTTATAGTTTTTCCAGTGAGGGTCTTGACAAAAATTTGCAT 1691208 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551 ||| |||| | ||||| ||| ||||||| || || ||||| ||||| || || | Sbjct 1691437 GCCTCCTCTAAGACGCAATACTAAATGCAGTGTCGACTCCTTTTGAATATTGTAGTCTGA 1691496 Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611 |||| ||| | || || | ||||| ||| | ||||| | |||||| ||||| | ||| Sbjct 1691497 CAAAGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAAATGAGACGCTGTTGATCTGGGGG 1691556 Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCAC 39671 | ||||||||||| ||||| || | | | | |||||| | | ||| || Sbjct 1691557 AATTCCTTCTTTGTCTTGAATTTTGGCCTTCACGTTTTCAATTGTGTCGGAGGCTTCGAC 1691616 Query 39672 GTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || | || || |||||||| || | |||||| || || || ||||| Sbjct 1691617 CTCAAGTGTGATGGTTTTACCTGTCAGAGTTTTGACAAAAATTTGCAT 1691664 >seq123 Length=3260300 Score = 95.1 bits (104), Expect = 8e-15 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 39530 CTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAA 39589 ||||||||||||||||||| | | ||| |||| ||||||||||| || | || | Sbjct 712125 CTTTTTGTATATTATAATCTTGAAGAGTGCGACCATCTTCCAATTGTTTACCAGCGAAGA 712184 Query 39590 TTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCG 39649 | || | ||||||||| | || | || |||||||| ||||| ||| | | Sbjct 712185 TCAACCTCTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGGATTTTAGCTTTGACATTTT 712244 Query 39650 CTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGA 39709 | | || || | ||| || ||||||||||| || || || ||||||||||| || | Sbjct 712245 CAATAGTATCAGAAGCTTCAACTTCCAAAGTAATGGTCTTGCCAGTTAAAGTTTTGACAA 712304 Query 39710 AGATCTGCAT 39719 |||||||||| Sbjct 712305 AGATCTGCAT 712314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347368088616581