Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1 295 5e-74 seq100 134 1e-25 seq89 111 1e-18 seq298 104 2e-16 >seq1 Length=8792355 Score = 295 bits (326), Expect = 5e-74 Identities = 847/1289 (66%), Gaps = 18/1289 (1%) Strand=Plus/Plus Query 517244 GTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACT 517303 || || || ||| | |||| ||||| | ||||| |||||||| | ||| || || ||| Sbjct 4238083 GTCGACTTGTCAACAGCAGAGACATTTAAGATACCGTTGGCATCAATATCGAAGGTAACT 4238142 Query 517304 TCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGA 517363 || |||||||| || |||| | ||||||||||| || | | ||| |||| ||| Sbjct 4238143 TCGATTTGAGGAACACCTCGTGGTGCAGGTGGGATGCCACTGAGTTCAAACTTTCCAAGA 4238202 Query 517364 TTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT 517423 || ||||| || || | ||||| || || | | ||| ||| || | | Sbjct 4238203 AGGTTGTTATCCTTGGTCATGGCACGTTCTCCTTCATAGACTTGAATAAGTACACCGGGC 4238262 Query 517424 TGATTATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCT 517482 || || || | |||||| || || |||| ||| || || || || || ||||| Sbjct 4238263 TGGTTGTCAGCATAAGTGGTGAAGG-TCTGAGTTTGCTTGGTGGGGATAGTGGTATTTCT 4238321 Query 517483 ATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGAC 517542 | || | | ||||| | ||||| || ||||| | ||||||||| ||||||||||| Sbjct 4238322 CTTGATCAGAGCAGTCATGACTCCACCAGCGGTTTCAATACCAAGAGATAGAGGAGTGAC 4238381 Query 517543 ATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTG 517602 ||| | || | | | |||| || |||| | | |||| |||| ||||| || || Sbjct 4238382 ATCGAGGAGAAGTAAGTCCTGAACTTCTTCAGACTTGTCACCAGCAAGGATAGCAGCCTG 4238441 Query 517603 AATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACC 517662 | |||||| ||||| |||||||| ||||||||||| | | || || |||| || || Sbjct 4238442 CACAGCAGCGCCATAGGCAACAGCCTCATCAGGATTGATCGATTTGTTGAGTTCCTTGCC 4238501 Query 517663 ATTGAAAAAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTA 517721 |||||| || | | |||||| | ||| | || || ||||| | ||||| ||||| | Sbjct 4238502 ATTGAAGAAGTCTTGAAGAAGCT-TCTGGATTTTGGGGATACGGGTAGATCCACCAACAA 4238560 Query 517722 ATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGG 517781 || || ||||| | ||| | ||||||| || | || | | || ||||||| Sbjct 4238561 GGACGATGTCATGAATCTGAGCCTTATCCATCTTGGCGTCGCGCAGAGACTTCTCAACGG 4238620 Query 517782 GTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAG 517841 | |||||| | | |||||||| | ||| || ||||| || |||||| || | | Sbjct 4238621 GCTCAAGAGTGCCACGGAACAAGTCAGCACAGAGCTCTTCAAAACGAGCTCTGGTGATCG 4238680 Query 517842 TGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAG 517901 | | ||||||| || || | | |||||| | ||||| | | |||||| || | Sbjct 4238681 AGGTGTAGAAATCAATACCCTCATAGAGAGAATCGATCTCAATGCTGGCTTGAGTAGATG 4238740 Query 517902 AAGATAGTGCACGTTTAGCACGTTCACATGCT-GTCCTTAGTCTTCGTAAGGCTTTTGCT 517960 |||| || | ||| || || | |||||| ||| || | | | || | ||| ||| Sbjct 4238741 AAGAAAGAGTACGCTTCGCTCTTTCACA-GCTAGTGCGCAAACGACGGAGGGC--ACGCT 4238797 Query 517961 GATTG--ATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAA 518018 |||| ||| |||| | || || || | ||||| || | ||| | | || | Sbjct 4238798 TATTGGCGGTCAGATCTTTCTTGTACTTGCGTTTGAACTCCTGCACAAAGTGGTTGACCA 4238857 Query 518019 GACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGA 518078 || || || || |||||||| ||||| | ||||| || | |||| | || | | Sbjct 4238858 TGCGGTTGTCGAAGTCTTCACCACCCAAGTGAGTATCACCAGCGGTAGACTTGACCTCAA 4238917 Query 518079 AAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAA 518138 | | |||||||| | | || || | |||||| ||| |||||||| | ||| |||| Sbjct 4238918 AGATACCATCTTCGATGGTCAGAATGGAAACATCAAAGGTGCCACCACCAAGATCGAAAA 4238977 Query 518139 TAAGTACATT---CATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAG 518195 | || || || | | || || || || || |||||||| |||| |||||||| Sbjct 4238978 TGAGCACGTTGCGCTCACCAGTGGCT---TTCTTGTCGAGACCATAGGCAATAGCAGCAG 4239034 Query 518196 CAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAG 518255 |||| |||||||| || || | || ||| || | || | || | || || || || | Sbjct 4239035 CAGTAGGTTCATTGATGATACGCAGAACGTTCATGCCTGAGATGGTACCAGCGTCCTTGG 4239094 Query 518256 TGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTT 518315 | || || | || || ||||| ||||| || ||||| || || ||||| || || Sbjct 4239095 TTGCCTGACGCTGCGAGTCGTTGAAATAAGCGGGAACGGTGATCACGGCGCTGGTGACGG 4239154 Query 518316 CTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTT 518375 ||||||| ||||| || |||| ||||| || | | ||| || | || Sbjct 4239155 TCTTACCAAGGTAAGCCTCAGCAGTTTCCTTCATCTTGACCAGGACCATCGAACTCACTT 4239214 Query 518376 GTTCTGGGGAATATTGCTTGGATTCATTTTGATA-TGATACTTCAAAATATGGTTTATTA 518434 ||| ||| | | ||| | ||| || ||| ||| |||| || | ||||| | Sbjct 4239215 CTTCGGGGTAGAAGGTCTTCGTTTCTCCTTTATACTGA-ACTTGAATCTTAGGTTTGCCA 4239273 Query 518435 CCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTA 518494 ||| || | | ||| || || ||||| | |||||| || | ||||||| | || | | Sbjct 4239274 CCATCACTGACAACATTGAAGGGCCAATGTTTCATGTCAGCTTGAACAGTAGCATCGTCA 4239333 Query 518495 AAATCTCTACCAATTAATCGTTTTGCATC 518523 ||| | |||||| | || || ||||| Sbjct 4239334 AAACGACGACCAATGAGACGCTTGGCATC 4239362 Score = 105 bits (116), Expect = 5e-17 Identities = 135/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582 |||||||||||||| |||| || || ||| | || | ||| || ||||| || || ||| Sbjct 4239658 CAAAAATAGTATTGTTTGGGTTCATGGCAACCTGGTTTTTAGCAGCATCGCCGATGAGAC 4239717 Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642 | || || || ||||| | |||||| || || ||||| ||||| || || || || | Sbjct 4239718 GCTCAGTGTCGGTAAAAGCAACATAACTGGGCGTAGTGCGGTTACCCTGGTCGTTAGCGA 4239777 Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702 ||||||| || || || | ||| | ||||| || || | || ||||| | ||||| Sbjct 4239778 TAATTTCGACCTTTCCGTGTTGAAACACACCGACGCACGAGTAGGTGGTTCCAAGATCAA 4239837 Query 518703 TACCAA 518708 |||||| Sbjct 4239838 TACCAA 4239843 >seq100 Length=4649179 Score = 134 bits (148), Expect = 1e-25 Identities = 151/201 (75%), Gaps = 6/201 (3%) Strand=Plus/Plus Query 518155 TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 518214 ||| |||| ||||||| | || ||||| |||||||||||||| |||||||| || | Sbjct 398429 TTTATCTTCAGTTTTATCCATGCCGTACGCTAAAGCAGCAGCAGTAGGTTCATTGATTAC 398488 Query 518215 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 518274 ||| || ||||| | || |||||| || |||||||| ||||| ||||| || || || Sbjct 398489 TCTTAAGACATTTAATCCTGCAATTTGACCAGCATCTTTGGTGGCCTGTCTCTGCGAGTC 398548 Query 518275 GTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCT 518334 |||||||||||||||||||| | ||| |||| ||||| |||| | ||| || Sbjct 398549 ATTAAAATATGCAGGAACAGTGACAACTGCATTTTTTACTGGAGTACCCAAGTAA---CT 398605 Query 518335 T---GCCGTTTGTTTCATTTT 518352 | || |||| ||||||||| Sbjct 398606 TTCAGCAGTTTCTTTCATTTT 398626 Score = 102 bits (112), Expect = 6e-16 Identities = 105/135 (78%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 322244 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATT-TTAAGAACATCTAAACCCGC 322302 ||||| || | ||| || ||||| |||||||| |||| | |||||| ||| ||| || || Sbjct 398451 CCGTACGCTAAAGCAGCAGCAGTAGGTTCATTGATTACTCTTAAGA-CATTTAATCCTGC 398509 Query 322303 AATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGT 322362 ||||| | ||| ||| || || |||||||| | ||||||||||||||| || ||||| Sbjct 398510 AATTTGACCAGCATCTTTGGTGGCCTGTCTCTGCGAGTCATTAAAATATGCAGGAACAGT 398569 Query 322363 AATAACTGCTTTATT 322377 | |||||| || || Sbjct 398570 GACAACTGCATTTTT 398584 >seq89 Length=3244750 Score = 111 bits (122), Expect = 1e-18 Identities = 121/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 668846 AGATTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATG 668905 ||||| | |||||||||||||| |||||||| || | ||||| |||||||| ||| | Sbjct 2610270 AGATTGAAGGGTAAAGAAGGTCGCATTAGAGGTAACCTTATGGGTAAACGTGTAGATTTT 2610211 Query 668906 TCTGCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCT 668965 ||||||||||||||||| || ||||||| ||| | || || |||||||||| || Sbjct 2610210 TCTGCACGTACAGTTATCACACCTGATCCAAATTTGAGAATCGATCAAGTTGGTGTACCA 2610151 Query 668966 CTTATTATTGCTAAAAATCTTACTTTTGACGAAATTGTAAC 669006 | | ||| || |||| | ||||| |||||||| || Sbjct 2610150 CGAAGTATCGCACAAAACTTGACTTTCCCAGAAATTGTCAC 2610110 Score = 86.0 bits (94), Expect = 5e-11 Identities = 91/119 (76%), Gaps = 1/119 (1%) Strand=Plus/Minus Query 671622 TTTGTCGAAA-TTCTTTTATTGAGGGTCTTGGACCTTTTGAATTTTTCTTCCAAGTAATG 671680 ||||| |||| ||| | | ||| |||||| ||| | ||||||| ||||| | ||| Sbjct 2608748 TTTGTAGAAAATTCATATCTTGCTGGTCTTACACCATCAGAATTTTATTTCCACGCTATG 2608689 Query 671681 GCAGGTCGTGAAGGTATTATTAATACGGCTATTAAAACTGCTGATACTGGTTATATTCA 671739 | ||||||||||||| |||| |||| ||| | ||||| ||||| || ||||| ||||| Sbjct 2608688 GGAGGTCGTGAAGGTCTTATCGATACTGCTGTAAAAACCGCTGAAACCGGTTACATTCA 2608630 >seq298 Length=2495523 Score = 104 bits (114), Expect = 2e-16 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 870789 CAAAGAAAATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGAC 870848 |||| | | || |||| || | ||| |||||| |||| || |||||||| |||| | Sbjct 1656967 CAAAAACAGTTCTTGTAGACTTTTCAAGCCCAAATGTTGCCAAGGAAATGCACGTTGGTC 1656908 Query 870849 ATTTAAGATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACG 870908 || | ||||| |||||||||||||| ||| | ||| |||| ||| | | ||||| Sbjct 1656907 ATCTGAGATCTACTATTATTGGTGAGAGTATCAGCAGGTTATTGGAATTTTTGGGACATA 1656848 Query 870909 ATGTTTATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTT 870968 | || | | || || ||| | ||||||||||| ||||| || || |||||||| ||| Sbjct 1656847 AAGTATTGAGAATCAACCATATTGGTGATTGGGGTACTCAGTTTGGAATGTTAATAGCTC 1656788 Query 870969 AT 870970 || Sbjct 1656787 AT 1656786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780804684484042