Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq34 109 6e-19 >seq34 Length=2688268 Score = 109 bits (120), Expect = 6e-19 Identities = 337/506 (67%), Gaps = 18/506 (4%) Strand=Plus/Plus Query 117293 CCTCATCTCGGGAAATAAGTTCATT--TGAGAAGCATAGGCCTGGCATGAGACCCCGCTT 117350 ||||||| || ||||| |||||||| ||| ||| | || |||||||| | ||| ||||| Sbjct 1149186 CCTCATCGCGAGAAATTAGTTCATTGCTGA-AAGTA-AGTCCTGGCATTAAACCTCGCTT 1149243 Query 117351 CTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAA 117409 |||||||||| | || || ||| || | || |||||| || || || ||| |||| Sbjct 1149244 CTTCAACCAAAATATGGCAGCAAAACTA-CCACTGAAGAAAATTCCTTCAACAGCTGCAA 1149302 Query 117410 ACGCAAAAAGGCGCTCGGCGAA-GGAGCGAGACT-TTGTGTC-AAACCATTTCATTGCCC 117466 | || | || ||||| || || | ||| ||| || || | | ||| ||||| |||| Sbjct 1149303 AAGCTATAACTCGCTCAGCAAATGTAGC---ACTCTTATGACTGATCCAGTTCATAGCCC 1149359 Query 117467 ATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTTTT 117526 | || || ||||| || ||| |||| ||||| || || | || || | | | | | Sbjct 1149360 AGTTAGCTTTCTTGGTAACACAAGGTAGAGTTTCAATTGCATTGAACAAGTAGTCCCTCT 1149419 Query 117527 CAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCATTT 117586 |||| ||| ||||||| | ||||| | |||||| |||| || || ||| Sbjct 1149420 GAGATGGATCAGTAATGTAGGTATCAATAAGAAGTGAATACATTTCTGAGTGCACATTTT 1149479 Query 117587 CATTATGGC--ATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGCACTTCATCCGC 117644 | ||||| ||| | | ||||| |||| || || | | || ||||| | || Sbjct 1149480 C--CATGGCTACTTGGAAGCCATAGAAGCAGCGAGCCTCAGTGACTTGAACTTCCT-GGC 1149536 Query 117645 AAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGGA 117703 ||| | | | || ||| ||| ||||| ||||| || ||||||||||||| | | Sbjct 1149537 TGAATCGCTCAACGAGATTTTCATTGACAATGCCATCAGAGGCAGCAAAGAATGCTAATA 1149596 Query 117704 TGTACTTTATGAATTTCTTTTCATTTTCATTCAGGGTCTTCCAGTCGTCAAGATCTTTGG 117763 | || || | || || || ||||||| | ||| |||| | ||| || | Sbjct 1149597 CATGAGAAATAAAATGTTTCTCGTTGTCATTCAACTTTGCCCAATCGTGCATATCCTTTG 1149656 Query 117764 ACAAATCAACTTCTTCCGCAGTCCAA 117789 | || || |||||||| | |||||| Sbjct 1149657 ATAAGTCTACTTCTTCGACCGTCCAA 1149682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589978167210680