Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq89 178 3e-39 seq256 140 7e-28 seq123 131 4e-25 seq222 118 2e-21 seq336 116 8e-21 seq1 87.8 4e-12 >seq89 Length=3244750 Score = 178 bits (196), Expect = 3e-39 Identities = 167/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 || ||| | ||||||||| ||||| || || || ||||| || | || || | ||||| Sbjct 1689834 CAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCAGACAGTGTGCGTCCATC 1689893 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| ||||| ||||| || |||||||| || || || ||||||||||||||||||||||| Sbjct 1689894 TTCCAGCTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGAATGCCTTCTTTGTC 1689953 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 |||||| || |||||| || ||||| ||||| ||| ||||||||| | ||| | || Sbjct 1689954 TTGAATCTTGGCCTTGACATTTTCAATAGTGTCGGAAGCTTCCACTTCCAAGGTGATGGT 1690013 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||||||||||| || || || || | ||||| Sbjct 1690014 CTTTCCTGTCAATGTCTTGACAAAGATCTGCAT 1690046 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || | ||| || | || || || ||||| |||||||||||||| || | | ||| Sbjct 1691443 TCTAAGACGCAATACTAAATGCAGTGTCGACTCCTTTTGAATATTGTAGTCTGACAAAGT 1691502 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | || ||||| ||||| || || ||||| || || || ||||| ||||| ||||| || Sbjct 1691503 GCGACCGTCTTCAAGCTGTTTTCCGGCGAAAATGAGACGCTGTTGATCTGGGGGAATTCC 1691562 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||||||||||||||| ||| ||||| ||||| ||||| || ||| || ||||| Sbjct 1691563 TTCTTTGTCTTGAATTTTGGCCTTCACGTTTTCAATTGTGTCGGAGGCTTCGACCTCAAG 1691622 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || ||||||| |||||| || || | |||||| Sbjct 1691623 TGTGATGGTTTTACCTGTCAGAGTTTTGACAAAAATTTGCAT 1691664 Score = 140 bits (154), Expect = 7e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| | ||||| || || ||||| ||||| ||||| |||||||| | ||||| Sbjct 1691671 TCTCAATCTGAGTACAAGATGCAGTGTGGATTCTTTCTGAATGTTGTAATCTGACAGAGT 1691730 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| | || || || || ||||| | || || || ||||| ||||| || Sbjct 1691731 GCGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTCTGCTGATCTGGTGGAATTCC 1691790 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || || ||||||||||| ||| || |||||||| || || ||| || || ||||| Sbjct 1691791 CTCCTTATCTTGAATTTTGGCCTTAACATTCTCAATAGTATCTGAAGACTCAACCTCAAG 1691850 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||| || |||| ||| || || || | |||||| Sbjct 1691851 GGTAATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 1691892 Score = 138 bits (152), Expect = 3e-27 Identities = 167/225 (74%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977 ||| | ||| | |||||||| || ||||| || || ||||| || ||||| | |||| | Sbjct 1691899 TCTCAATCTGAGTACAAGGTGGAGTGTGGATTCCTTCTGAATGTTATAATCAGACAAG-G 1691957 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 | | ||||||||||||||||| ||||| ||||| | || || |||||||| || |||| Sbjct 1691958 TGCGTCCATCTTCGAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGGTCTGGGGGGATGC 1692017 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 | |||||||||||||| ||| ||| || || ||||||||||| || || || || | Sbjct 1692018 CCTCTTTGTCTTGAATCTTTGCCTTAACATTTTCAATGGTGTCGGATGCCTCGACCTCCA 1692077 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || | || || || |||| || || || || | ||||||| Sbjct 1692078 ATGTGATGGTTTTACCAGTCAGCGTCTTCACAAAGATCTGCATTT 1692122 Score = 134 bits (148), Expect = 3e-26 Identities = 158/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 || ||| | ||||||||| ||||||||||| || || ||||| | | || | ||||| Sbjct 1690996 CAGAACCAAGTGAAGAGTTGACTCTTTTTGGATGTTATAATCTGACAATGTGCGACCATC 1691055 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| | || ||||| || || || | || || ||||||||||| |||||||||||||| Sbjct 1691056 TTCCAATTGTTTACCAGCAAAAATTAAACGCTGCTGGTCTGGAGGGATGCCTTCTTTGTC 1691115 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 |||||||| || || || ||||| ||||| || ||| |||||||| || | || Sbjct 1691116 CTGAATTTTAGCTTTCACATTTTCAATTGTGTCAGATGCTTCGACTTCAAGAGTTATAGT 1691175 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||||| || | || || || || | ||||||| Sbjct 1691176 TTTTCCAGTGAGGGTCTTGACAAAAATTTGCATT 1691209 Score = 129 bits (142), Expect = 1e-24 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || |||||||||||||||||||| || || | | || | |||||||| | ||| Sbjct 1691233 GTGGAGGGTGGACTCTTTTTGAATATTATAGTCCGACAATGTGCGACCATCTTCCAACTG 1691292 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| || || || | || || || ||||| || || |||||||||||||| || || Sbjct 1691293 CTTACCAGCAAAAATTAAACGCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGGATCTT 1691352 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||| || ||||| ||||| || || ||||| | |||| || || || || Sbjct 1691353 GGCCTTGACATTTTCAATTGTGTCTGAGGCCTCGACTTCCAAAGTAATGGTTTTACCAGT 1691412 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 ||| ||||| || || | |||||| Sbjct 1691413 CAATGTTTTAACAAAGATTTGCAT 1691436 Score = 123 bits (136), Expect = 6e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002 ||| |||||||| ||||||||||| || | ||||| | ||||| || || || || || Sbjct 1690783 AGTTGACTCTTTCTGAATATTGTAGTCAGATAGAGTGCGACCATCCTCAAGTTGTTTGCC 1690842 Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062 || ||||| || || ||||||||||| || || || ||||| |||||||| || || Sbjct 1690843 AGCAAAGATGAGACGCTGTTGGTCTGGTGGGATTCCCTCTTTATCTTGAATCTTAGCTTT 1690902 Query 195063 GACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122 ||| || ||||| ||||| ||| ||| || || | || | ||||| || |||| ||| Sbjct 1690903 GACATTTTCAATAGTGTCAGAAGCTTCAACCTCCAATGTGATAGTCTTGCCAGTCAGAGT 1690962 Query 195123 TTTTACGAACACTTGCAT 195140 || || || | ||||| Sbjct 1690963 CTTGACAAAAATCTGCAT 1690980 Score = 118 bits (130), Expect = 2e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || || || ||||| || ||||| || ||||| | || || | ||||| || | |||| Sbjct 1690550 TGGAGGGTTGACTCCTTCTGAATGTTATAATCTGAGAGTGTACGTCCATCCTCCAACTGC 1690609 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| || || || || || |||||||||||||| || ||||| ||||| || ||||| Sbjct 1690610 TTACCAGCAAAAATTAGACGCTGTTGGTCTGGAGGGATACCTTCCTTGTCCTGGATTTTG 1690669 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 || || ||||||||||| || ||| ||| || || | || | ||||| || || Sbjct 1690670 GCTTTCACATTCTCAATGGTATCAGAAGCTTCAACCTCCAAAGTGATGGTCTTACCAGTA 1690729 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | ||| ||||| || | ||||| Sbjct 1690730 AGAGTCTTTACAAAAATCTGCAT 1690752 Score = 116 bits (128), Expect = 8e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 194929 AAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCT 194988 || || | |||||| || ||||||||||| |||||||| || | ||||| | ||||| Sbjct 1689607 AATACTAAGTGAAGTGTAGACTCTTTTTGGATATTGTAGTCTGATAGAGTACGACCATCC 1689666 Query 194989 TCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 || || ||||| || || || || | || || ||||||||||| || ||||| ||||| Sbjct 1689667 TCAAGTTGCTTGCCAGCAAAAATCAAACGCTGCTGGTCTGGAGGGATACCTTCCTTGTCC 1689726 Query 195049 TGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTC 195108 || || || || || ||||||||||| || ||| ||| || || | || | ||| Sbjct 1689727 TGGATCTTGGCTTTTACATTCTCAATGGTATCAGAAGCTTCAACCTCCAATGTGATGGTC 1689786 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || | ||| || || || | ||||| Sbjct 1689787 TTACCAGTAAGAGTCTTAACAAAAATCTGCAT 1689818 >seq256 Length=3517054 Score = 140 bits (154), Expect = 7e-28 Identities = 154/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 ||||| || || || || |||||||||||||||| | || | |||||||| | || Sbjct 130809 TGAAGGGTAGATTCCTTCTGAATATTGTAATCGGACAATGTACGTCCATCTTCCAATTGT 130868 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || |||||||| | || ||| |||||||||||||| ||||| || ||||| ||||| Sbjct 130869 TTTCCGGCGAAGATCAATCTTTGCTGGTCTGGAGGAATTCCTTCCTTATCTTGGATTTTG 130928 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 |||||| || |||||| |||| | || || |||||||| | || |||||||| Sbjct 130929 GCCTTGACATTTTCAATGCTGTCAGCCGCATCAACCTCAAGGGTGATGGTTTTTCCTGTG 130988 Query 195118 AAAGTTTTTACGAACACTTGCATTT 195142 | ||||| || || | |||||||| Sbjct 130989 AGTGTTTTCACAAAGATTTGCATTT 131013 >seq123 Length=3260300 Score = 131 bits (144), Expect = 4e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 ||||||| ||||| ||||| |||||| | |||||||| | || ||||| ||||||| Sbjct 712125 CTTTTTGTATATTATAATCTTGAAGAGTGCGACCATCTTCCAATTGTTTACCAGCGAAGA 712184 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCT 195070 | | | || || ||||||||||| || ||||||||||| ||||| ||||| || | Sbjct 712185 TCAACCTCTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGGATTTTAGCTTTGACATTTT 712244 Query 195071 CAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGA 195130 |||| || || ||| ||| ||||| | |||| ||||| || || |||||||| || | Sbjct 712245 CAATAGTATCAGAAGCTTCAACTTCCAAAGTAATGGTCTTGCCAGTTAAAGTTTTGACAA 712304 Query 195131 ACACTTGCATTT 195142 | | ||||||| Sbjct 712305 AGATCTGCATTT 712316 >seq222 Length=7060343 Score = 118 bits (130), Expect = 2e-21 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 |||| || ||||||||||| ||| || | |||||||| | || ||||| || |||| Sbjct 1553859 CTTTCTGGATATTGTAATCTTGAAGGGTACGACCATCTTCCAATTGTTTACCGGCAAAGA 1553918 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCT 195070 | | || ||| || |||||||| || |||||||| || || ||||| |||||| || | Sbjct 1553919 TCAATCTTTGCTGATCTGGAGGGATTCCTTCTTTATCCTGGATTTTAGCCTTGACATTTT 1553978 Query 195071 CAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGA 195130 |||| ||||| || || || || | ||| | ||||| || ||||||||||| || | Sbjct 1553979 CAATAGTGTCAGAGGCCTCAACCTCCAAGGTGATGGTCTTACCAGTCAAAGTTTTAACAA 1554038 Query 195131 ACACTTGCAT 195140 | | ||||| Sbjct 1554039 AAATCTGCAT 1554048 >seq336 Length=3726090 Score = 116 bits (128), Expect = 8e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 ||||||| || |||||||| ||||| | |||||||| | || || || || |||| Sbjct 1528380 CTTTTTGGATGTTGTAATCTTGGAGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAGA 1528439 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCT 195070 | | || ||| || || |||||||| ||||| || ||||| ||||| |||||| || | Sbjct 1528440 TCAATCTTTGCTGATCCGGAGGAATTCCTTCCTTATCTTGGATTTTGGCCTTGACATTTT 1528499 Query 195071 CAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGA 195130 |||| || || || ||| || || | ||||| || || || ||||||||||| || | Sbjct 1528500 CAATAGTATCAGAGGCTTCGACCTCCAAGGTAATAGTTTTACCAGTCAAAGTTTTGACAA 1528559 Query 195131 ACACTTGCATTT 195142 | | ||||||| Sbjct 1528560 AGATCTGCATTT 1528571 >seq1 Length=8792355 Score = 87.8 bits (96), Expect = 4e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| || || ||||| ||||| || || || | ||| || | ||||||||| Sbjct 1064683 ACAAGGTGAAGGGTTGATTCTTTCTGAATGTTATAGTCTGAAAGTGTGCGTCCATCTTCG 1064624 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 || || || || || ||||| | || ||| || ||||||||||| ||| Sbjct 1064623 AGTTGTTTTCCAGCAAAGATTAATCTTTGCTGATCTGGAGGAATTCCT 1064576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109476525161819