Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq211 150 1e-31 >seq211 Length=1509898 Score = 150 bits (166), Expect = 1e-31 Identities = 179/243 (74%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209 ||||||| ||||| || || || |||||||||||||| ||||| ||||| |||| ||| Sbjct 51119 CATGTCCACGTACTTGGCCCCAAAGTGCCTCCACTGGAAGCCGTAAACCGGGCCCAAGTC 51060 Query 30210 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30269 || | || | | | |||||| | || | ||| || | || |||||||||| Sbjct 51059 GCCGACCTCGCGATCCCGGAAGCCGAGCGAATCGAGAAACTCGCGAGACGCGTTGGCGTC 51000 Query 30270 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCA 30329 ||| || || | || || |||||||||| |||| ||| || || || | || |||||| Sbjct 50999 CCAAATTTTAATACCTTTGGCGGAGAGCTCGTTGGCGTTGGTCGAGCCACGGATGAACCA 50940 Query 30330 CAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAACTG 30389 ||||||||||| ||||||| |||||| || ||||||||||| || || ||||| || Sbjct 50939 GAGCAGCTCCTCGGCGACGGCGCGCCAAAATACTCTCTTGGTCGTCAGAAGCGGAAATTG 50880 Query 30390 TCC 30392 || Sbjct 50879 GCC 50877 Score = 140 bits (154), Expect = 3e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 29878 ACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGC 29937 ||||| || |||||| | ||||| || |||||| ||| ||||| ||||| ||||| || Sbjct 51455 ACGTGCGCTATCATGCAGGTGAGCAGCGAGTAGGAGGCAATGTTGAAGGGCACCCCCAGA 51396 Query 29938 CCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAAC 29997 |||||||| || | ||||||||| | ||||| |||||||| |||| || ||||||||| Sbjct 51395 CCCATGTCGCCGGCCCTCTGGTACAAGTGACAGGAGAGCTCGCCGTTGCAGACGTAAAAC 51336 Query 29998 TGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCG 30057 || || | |||||| || || || ||||| | ||| || ||||||||| Sbjct 51335 TGGGCCAGCGAGTGGCAGGGCGGCAGGGCCATCTTCGGGATGTCGACCGGATTCCAGGCG 51276 Query 30058 CACACGATGATGCGCCTGTCTTCTGGGTTGTT 30089 | || ||||||||| ||||| || || || || Sbjct 51275 CTCATGATGATGCGTCTGTCGTCGGGATTATT 51244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408615822130361