Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq89 147 2e-30 seq123 145 6e-30 seq256 138 9e-28 seq222 118 8e-22 >seq89 Length=3244750 Score = 147 bits (162), Expect = 2e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| || ||||| || || |||||||| || || ||||| | | || | | Sbjct 1690993 ACGCAGAACCAAGTGAAGAGTTGACTCTTTTTGGATGTTATAATCTGACAATGTGCGACC 1691052 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| |||||||| ||||| ||||| || |||||||| || || || || ||||||||||| Sbjct 1691053 ATCTTCCAATTGTTTACCAGCAAAAATTAAACGCTGCTGGTCTGGAGGGATGCCTTCTTT 1691112 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 || |||||||| ||| ||| |||| | |||||||| | ||| ||||||||||| | Sbjct 1691113 GTCCTGAATTTTAGCTTTCACATTTTCAATTGTGTCAGATGCTTCGACTTCAAGAGTTAT 1691172 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || || | || || ||||| || ||||| Sbjct 1691173 AGTTTTTCCAGTGAGGGTCTTGACAAAAATTTGCAT 1691208 Score = 141 bits (156), Expect = 7e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||| | |||||| |||||||| | || || ||||| || |||||||| || | Sbjct 1690754 CCACCTCGCAGACGTAATACTAAATGCAAAGTTGACTCTTTCTGAATATTGTAGTCAGAT 1690813 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | |||| || | ||| || || ||||| || | ||||||||| || || || Sbjct 1690814 AGAGTGCGACCATCCTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGGTCTGGTGGG 1690873 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || |||||||||||||| || ||| ||| |||| | ||||||||| | ||| || Sbjct 1690874 ATTCCCTCTTTATCTTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGCTTCAACC 1690933 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || | |||| || ||||| || | ||| || ||||| ||||||||| Sbjct 1690934 TCCAATGTGATAGTCTTGCCAGTCAGAGTCTTGACAAAAATCTGCATG 1690981 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| | ||| || |||||||| || || || || ||||| |||||||| || | Sbjct 1691438 CCTCCTCTAAGACGCAATACTAAATGCAGTGTCGACTCCTTTTGAATATTGTAGTCTGAC 1691497 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | | || || | || || || || || || | |||||||||||| || ||| Sbjct 1691498 AAAGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAAATGAGACGCTGTTGATCTGGGGGA 1691557 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||| ||||||||||| || || |||| | ||||| || | ||| || Sbjct 1691558 ATTCCTTCTTTGTCTTGAATTTTGGCCTTCACGTTTTCAATTGTGTCGGAGGCTTCGACC 1691617 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| |||| ||||| || || | |||||| ||||| || ||||| Sbjct 1691618 TCAAGTGTGATGGTTTTACCTGTCAGAGTTTTGACAAAAATTTGCAT 1691664 Score = 132 bits (146), Expect = 4e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 |||||| ||||| ||||| ||||| |||||||| |||||||| || | | ||| | | Sbjct 1689603 ACGTAATACTAAGTGAAGTGTAGACTCTTTTTGGATATTGTAGTCTGATAGAGTACGACC 1689662 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | |||||| || ||||| ||||||||||| || || || || || ||||| || Sbjct 1689663 ATCCTCAAGTTGCTTGCCAGCAAAAATCAAACGCTGCTGGTCTGGAGGGATACCTTCCTT 1689722 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 || || || || ||||||| | || | || ||||| | ||| || || | |||| Sbjct 1689723 GTCCTGGATCTTGGCTTTTACATTCTCAATGGTATCAGAAGCTTCAACCTCCAATGTGAT 1689782 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || | ||| || ||||| |||||||| Sbjct 1689783 GGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 1689818 Score = 129 bits (142), Expect = 5e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| || ||||| || || || || || || ||||| || | | || | | Sbjct 1689831 ACGCAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCAGACAGTGTGCGTCC 1689890 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| |||| || ||||| ||||| || | |||||| ||||| || |||||||||||||| Sbjct 1689891 ATCTTCCAGCTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGAATGCCTTCTTT 1689950 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 |||||||| || || ||| |||| | |||||| || | ||||||||| | |||| Sbjct 1689951 GTCTTGAATCTTGGCCTTGACATTTTCAATAGTGTCGGAAGCTTCCACTTCCAAGGTGAT 1690010 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || || || || ||||| |||||||| Sbjct 1690011 GGTCTTTCCTGTCAATGTCTTGACAAAGATCTGCAT 1690046 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| || | | || | ||| || || |||||||| || || |||||||| | Sbjct 1691666 CCTCCTCTCAATCTGAGTACAAGATGCAGTGTGGATTCTTTCTGAATGTTGTAATCTGAC 1691725 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | |||| |||||||| || || ||||| ||||| | ||| ||||| || ||| Sbjct 1691726 AGAGTGCGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTCTGCTGATCTGGTGGA 1691785 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || || |||||||||||||| || ||| | || | ||| || || | || || Sbjct 1691786 ATTCCCTCCTTATCTTGAATTTTGGCCTTAACATTCTCAATAGTATCTGAAGACTCAACC 1691845 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || | || ||||| || | ||| || ||||| || ||||| Sbjct 1691846 TCAAGGGTAATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 1691892 >seq123 Length=3260300 Score = 145 bits (160), Expect = 6e-30 Identities = 146/190 (77%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 101280 CTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATA 101339 ||||||||||||| ||||| | ||| | |||| |||||||| ||||| || || | Sbjct 712125 CTTTTTGTATATTATAATCTTGAAGAGTGCGACCATCTTCCAATTGTTTACCAGCGAAGA 712184 Query 101340 TCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTT 101399 |||| | ||| ||||| || ||||| || ||||| ||||| ||||| ||| ||| ||| Sbjct 712185 TCAACCTCTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGGATTTTAGCTTTGACATTTT 712244 Query 101400 CTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAA 101459 | | ||| ||||| | ||| ||||| | ||| | || ||||| ||||||||||| |||| Sbjct 712245 CAATAGTATCAGAAGCTTCAACTTCCAAAGTAATGGTCTTGCCAGTTAAAGTTTTGACAA 712304 Query 101460 ATATCTGCAT 101469 | |||||||| Sbjct 712305 AGATCTGCAT 712314 >seq256 Length=3517054 Score = 138 bits (152), Expect = 9e-28 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 |||||||||||||||||||| || || ||||||||||||| | || | |||| ||| Sbjct 130803 ACTAAATGAAGGGTAGATTCCTTCTGAATATTGTAATCGGACAATGTACGTCCATCTTCC 130862 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 ||||| || || || || ||||| | || || || || ||||| ||||| |||||||| Sbjct 130863 AATTGTTTTCCGGCGAAGATCAATCTTTGCTGGTCTGGAGGAATTCCTTCCTTATCTTGG 130922 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| || ||| |||| | |||||| || || || ||||| |||| ||||| Sbjct 130923 ATTTTGGCCTTGACATTTTCAATGCTGTCAGCCGCATCAACCTCAAGGGTGATGGTTTTT 130982 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | ||||| ||||| || ||||| Sbjct 130983 CCTGTGAGTGTTTTCACAAAGATTTGCAT 131011 >seq222 Length=7060343 Score = 118 bits (130), Expect = 8e-22 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 101280 CTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATA 101339 |||| || ||||||||||| | || | |||| |||||||| ||||| ||||| | Sbjct 1553859 CTTTCTGGATATTGTAATCTTGAAGGGTACGACCATCTTCCAATTGTTTACCGGCAAAGA 1553918 Query 101340 TCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTT 101399 |||| | || ||||| || || || ||||||||||| || ||||| || ||| ||| Sbjct 1553919 TCAATCTTTGCTGATCTGGAGGGATTCCTTCTTTATCCTGGATTTTAGCCTTGACATTTT 1553978 Query 101400 CTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAA 101459 | | ||||||||| | || || || | |||| || || || || |||||||| |||| Sbjct 1553979 CAATAGTGTCAGAGGCCTCAACCTCCAAGGTGATGGTCTTACCAGTCAAAGTTTTAACAA 1554038 Query 101460 ATATCTGCAT 101469 | |||||||| Sbjct 1554039 AAATCTGCAT 1554048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396276675817449