Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq89 109 4e-19 seq336 91.5 1e-13 seq222 87.8 1e-12 >seq89 Length=3244750 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| || || || ||||| || ||||| || || ||| |||||||||||||| || || Sbjct 1691437 GCCTCCTCTAAGACGCAATACTAAATGCAGTGTCGACTCCTTTTGAATATTGTAGTCTGA 1691496 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 | | | ||| |||| || | ||| || ||||| || || || ||||||||||| | ||| Sbjct 1691497 CAAAGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAAATGAGACGCTGTTGATCTGGGGG 1691556 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 || || || ||||| ||| || || || | | | || || || || || Sbjct 1691557 AATTCCTTCTTTGTCTTGAATTTTGGCCTTCACGTTTTCAATTGTGTCGGAGGCTTCGAC 1691616 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| | || || ||||| || |||| |||||| |||||||| ||||| Sbjct 1691617 CTCAAGTGTGATGGTTTTACCTGTCAGAGTTTTGACAAAAATTTGCAT 1691664 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || ||| ||||||||||||||| || || || | | ||| | || ||| Sbjct 1691228 ACCAAGTGGAGGGTGGACTCTTTTTGAATATTATAGTCCGACAATGTGCGACCATCTTCC 1691287 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 ||||||||||| ||||| || | ||||| ||||| | || | || || ||||| Sbjct 1691288 AACTGCTTACCAGCAAAAATTAAACGCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGG 1691347 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || ||| | | | ||||| ||||| || |||| ||||| ||||| Sbjct 1691348 ATCTTGGCCTTGACATTTTCAATTGTGTCTGAGGCCTCGACTTCCAAAGTAATGGTTTTA 1691407 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| ||||| ||||| || ||||| Sbjct 1691408 CCAGTCAATGTTTTAACAAAGATTTGCAT 1691436 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| ||||||||| || || ||| || ||||| || ||||| || || | || Sbjct 1690535 AGACGCAGCACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAATCTGAGAGTGTACGT 1690594 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||||||||||||| ||||| || || |||||||| || | || | || ||| Sbjct 1690595 CCATCCTCCAACTGCTTACCAGCAAAAATTAGACGCTGTTGGTCTGGAGGGATACCTTCC 1690654 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| || || ||| ||| | | | || || || || ||||||| || Sbjct 1690655 TTGTCCTGGATTTTGGCTTTCACATTCTCAATGGTATCAGAAGCTTCAACCTCCAAAGTG 1690714 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || | ||| ||||||||||||||||| Sbjct 1690715 ATGGTCTTACCAGTAAGAGTCTTTACAAAAATCTGCAT 1690752 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || || || ||||| | || |||||| ||||||||||| ||||||||| | ||| Sbjct 1690763 AGACGTAATACTAAATGCAAAGTTGACTCTTTCTGAATATTGTAGTCAGATAGAGTGCGA 1690822 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | || || || ||||| || || |||||||| || | || | ||||| Sbjct 1690823 CCATCCTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGGTCTGGTGGGATTCCCTCT 1690882 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 || || |||||| ||| ||| | | || || || || || ||||||| || Sbjct 1690883 TTATCTTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGCTTCAACCTCCAATGTG 1690942 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || |||| ||| || |||||||||||||| Sbjct 1690943 ATAGTCTTGCCAGTCAGAGTCTTGACAAAAATCTGCAT 1690980 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || |||| || || || || || || || || ||||||||| |||||||| || ||| Sbjct 1689592 CCACCCCGGAGACGTAATACTAAGTGAAGTGTAGACTCTTTTTGGATATTGTAGTCTGAT 1689651 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | ||| | || || | ||||| || ||||| |||| ||||| || || | || Sbjct 1689652 AGAGTACGACCATCCTCAAGTTGCTTGCCAGCAAAAATCAAACGCTGCTGGTCTGGAGGG 1689711 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || |||||||| ||||| ||||||| | | | || || || || ||| Sbjct 1689712 ATACCTTCCTTGTCCTGGATCTTGGCTTTTACATTCTCAATGGTATCAGAAGCTTCAACC 1689771 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || || || || || | ||| || |||||||||||||| Sbjct 1689772 TCCAATGTGATGGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 1689818 >seq336 Length=3726090 Score = 91.5 bits (100), Expect = 1e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 48577 CTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATA 48636 ||||||| || |||||||| ||| | ||| | || || || || || || ||||| | Sbjct 1528380 CTTTTTGGATGTTGTAATCTTGGAGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAGA 1528439 Query 48637 TCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAAC 48696 ||| || || ||||||| |||| || ||||| || || || || ||| Sbjct 1528440 TCAATCTTTGCTGATCCGGAGGAATTCCTTCCTTATCTTGGATTTTGGCCTTGACATTTT 1528499 Query 48697 CCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAA 48756 | | || || || || || ||||||| ||||| ||||| || ||||||||||| |||| Sbjct 1528500 CAATAGTATCAGAGGCTTCGACCTCCAAGGTAATAGTTTTACCAGTCAAAGTTTTGACAA 1528559 Query 48757 AAATCTGCAT 48766 | |||||||| Sbjct 1528560 AGATCTGCAT 1528569 >seq222 Length=7060343 Score = 87.8 bits (96), Expect = 1e-12 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 48577 CTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATA 48636 |||| || ||||||||||| || | ||| | || ||||| || ||||||||||| | Sbjct 1553859 CTTTCTGGATATTGTAATCTTGAAGGGTACGACCATCTTCCAATTGTTTACCGGCAAAGA 1553918 Query 48637 TCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAAC 48696 ||| || || ||||| | || | || || || || || || || ||| Sbjct 1553919 TCAATCTTTGCTGATCTGGAGGGATTCCTTCTTTATCCTGGATTTTAGCCTTGACATTTT 1553978 Query 48697 CCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAA 48756 | | || || || ||||| ||||||| || || || || || ||||||||||| |||| Sbjct 1553979 CAATAGTGTCAGAGGCCTCAACCTCCAAGGTGATGGTCTTACCAGTCAAAGTTTTAACAA 1554038 Query 48757 AAATCTGCATCGTGTG 48772 |||||||||| |||| Sbjct 1554039 AAATCTGCATATTGTG 1554054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380935942564311