Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq34 100 5e-16 >seq34 Length=2688268 Score = 100 bits (110), Expect = 5e-16 Identities = 184/268 (69%), Gaps = 4/268 (1%) Strand=Plus/Plus Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484 ||||| || ||||||||||| || || || | ||||| || |||||| | |||||| Sbjct 1149458 TACATTTCTGAGTGCACATTTTCCATGGCTACTTGGAAGCCATAGAAGCAGCGAGCCTCA 1149517 Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAA 48544 || || ||||| | ||||| ||| | ||||| |||||||| || ||||| || Sbjct 1149518 GTGACTTGAACTTCCTGGCTGAATCGCTCAACGAGATTTTCATTGACAATGCCATCAGAG 1149577 Query 48545 GCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT- 48603 ||||||||||| || | ||||| || ||||| |||||||| | | | || Sbjct 1149578 GCAGCAAAGAATGCTAATACATGAGAAATAAAATGTTTCTCGTTGTCATT--CAACTTTG 1149635 Query 48604 -CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTG 48662 ||| | || | || || | ||| |||||||| || ||||| || || || | Sbjct 1149636 CCCAATCGTGCATATCCTTTGATAAGTCTACTTCTTCGACCGTCCAAAATGAAGCCTCAG 1149695 Query 48663 CTTTTTTGTACATGCCCCATATGTCCGG 48690 |||| ||||||||| ||| || || || Sbjct 1149696 CTTTCTTGTACATGTGCCAAATATCAGG 1149723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931528643034880