Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq34 109 7e-19 seq56 82.4 9e-11 >seq34 Length=2688268 Score = 109 bits (120), Expect = 7e-19 Identities = 337/506 (67%), Gaps = 18/506 (4%) Strand=Plus/Minus Query 64713 TTGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGACCCTGAATGA 64772 |||||| | |||||||| || || || || ||| | |||| ||| | ||||||| Sbjct 1149682 TTGGACGGTCGAAGAAGTAGACTTATCAAAGGATATGCACGATTGGGCAAAGTTGAATGA 1149623 Query 64773 AAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATTGT 64832 || || || | || || | | | ||||||||||||| || ||||| ||||| Sbjct 1149622 CAACGAGAAACATTTTATTTCTCATGTATTAGCATTCTTTGCTGCCTCTGATGGCATTGT 1149563 Query 64833 TTTTGAGAATATCAATAA-CAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTCAT 64891 ||| ||| || | | | ||| || | ||||| || | | || || |||| | Sbjct 1149562 CAATGAAAATCTCGTTGAGCGATTCAGCC-AGGAAGTTCAAGTCACTGAGGCTCGCTGCT 1149504 Query 64892 TCTACGCATATCAAT--GCCATAATGAAATGGTTCATGGCGAAACATATTCAAAATTGAT 64949 |||| | | ||| ||||| |||| || || |||| |||||| | || Sbjct 1149503 TCTATGGCTTCCAAGTAGCCATG--GAAAATGTGCACTCAGAAATGTATTCACTTCTTAT 1149446 Query 64950 TGACAAATACATTAAGGATGGATCTGAAAAGAAGCAGTTATTTGAAGCCATCCAAACTGT 65009 ||| | ||||||| ||| |||| | | | | | || || | || || ||||| | Sbjct 1149445 TGATACCTACATTACTGATCCATCTCAGAGGGACTACTTGTTCAATGCAATTGAAACTCT 1149386 Query 65010 ACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTT-GACACAA-AGTCTCGC 65067 ||| ||| || ||||| || || ||||| ||||| ||| | | || || ||| || Sbjct 1149385 ACCTTGTGTTACCAAGAAAGCTAACTGGGCTATGAACTGGATCAGTCATAAGAGT---GC 1149329 Query 65068 TCC-TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126 | | || || ||||| || | || ||||| ||| || || || |||||| || | Sbjct 1149328 TACATTTGCTGAGCGAGTTATAGCTTTTGCAGCTGTTGAAGGAATTTTCTTCAGTGG-TA 1149270 Query 65127 ATTCTGC-GCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCA- 65184 || ||| || || | ||||||||||||||| ||| | |||||||| || | ||| ||| Sbjct 1149269 GTTTTGCTGCCATATTTTGGTTGAAGAAGCGAGGTTTAATGCCAGGACT-TACTT-TCAG 1149212 Query 65185 -AATGAACTTATTTCCCGAGATGAGG 65209 |||||||| ||||| || ||||||| Sbjct 1149211 CAATGAACTAATTTCTCGCGATGAGG 1149186 >seq56 Length=4197193 Score = 82.4 bits (90), Expect = 9e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 75872 GATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTAC 75931 ||| | |||| ||| || | | ||||| || |||||||||||||| ||| | ||| Sbjct 1120871 GATTTATGGACAGCTGTTTTGATGTCACAAGTAGAAACTGGAACACCATACATGTTATAC 1120930 Query 75932 AAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAAT 75991 || ||||||||||| || || ||| | |||||||| ||||||| || ||| Sbjct 1120931 AAAGATGCTTGTAATCGTAAATCCAATCAACAAAATTTGGGCACAATCAGAAGTAGTAAT 1120990 Query 75992 CTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCA 76051 | || || || || || ||||| || ||||| ||| ||||| ||||||||| Sbjct 1120991 TTATGTACTGAGGTTGTACAGTACTCATCACCTGATGAAGTGGCAGTTTGTAATTTGGCA 1121050 Query 76052 TCAATCGC 76059 ||||| || Sbjct 1121051 TCAATTGC 1121058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596566937808160