Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq89 136 6e-27 seq336 132 7e-26 seq123 131 2e-25 seq222 120 4e-22 seq34 114 2e-20 seq256 113 7e-20 >seq89 Length=3244750 Score = 136 bits (150), Expect = 6e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| ||| | || || | |||||||||||||| || | |||||||||| || Sbjct 1691209 AATGCAAATTTTTGTCAAGACCCTCACTGGAAAAACTATAACTCTTGAAGTCGAAGCATC 1691150 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||| | ||| ||| |||||| |||||| || || ||||||||||| |||||||| || Sbjct 1691149 TGACACAATTGAAAATGTGAAAGCTAAAATTCAGGACAAAGAAGGCATCCCTCCAGACCA 1691090 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 || | || |||| ||| ||||| || | |||||| | || || ||||||||||| Sbjct 1691089 GCAGCGTTTAATTTTTGCTGGTAAACAATTGGAAGATGGTCGCACATTGTCAGATTATAA 1691030 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGT 156031 || |||||| | || ||||| || || Sbjct 1691029 CATCCAAAAAGAGTCAACTCTTCACTTGGT 1691000 Score = 125 bits (138), Expect = 1e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| |||||||||||||||| ||||| ||||| || |||||||| | || Sbjct 1691436 ATGCAAATCTTTGTTAAAACATTGACTGGTAAAACCATTACTTTGGAAGTCGAGGCCTCA 1691377 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| ||| || || || || ||||| |||||||| || || ||||| || Sbjct 1691376 GACACAATTGAAAATGTCAAGGCCAAGATCCAAGACAAAGAAGGAATCCCACCAGATCAG 1691317 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | || |||| ||| ||||||||| | |||||| | || || || || |||||| Sbjct 1691316 CAGCGTTTAATTTTTGCTGGTAAGCAGTTGGAAGATGGTCGCACATTGTCGGACTATAAT 1691257 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGT 156031 || |||||| | || || || || || Sbjct 1691256 ATTCAAAAAGAGTCCACCCTCCACTTGGT 1691228 Score = 114 bits (126), Expect = 2e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 |||||||| || ||| | || || ||||||| ||||| || ||||| || ||||| | Sbjct 1692123 AAAATGCAGATCTTTGTGAAGACGCTGACTGGTAAAACCATCACATTGGAGGTCGAGGCA 1692064 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 || || | ||| ||| || || || || ||||| ||||| ||||| || ||||| Sbjct 1692063 TCCGACACCATTGAAAATGTTAAGGCAAAGATTCAAGACAAAGAGGGCATCCCCCCAGAC 1692004 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 || || |||||||| | ||| || ||||||||||||||| | || || || |||||| Sbjct 1692003 CAGCAGAGATTGATCTTTGCAGGAAAGCAGCTCGAAGATGGACGCACCTTGTCTGATTAT 1691944 Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || || || | || || || | || | ||||| ||||| ||| Sbjct 1691943 AACATTCAGAAGGAATCCACACTCCACCTTGTACTCAGATTGAGAGGTGGT 1691893 Score = 109 bits (120), Expect = 8e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || ||||||| || ||||| ||||| || || |||| |||| Sbjct 1690980 ATGCAGATTTTTGTCAAGACTCTGACTGGCAAGACTATCACATTGGAGGTTGAAGCTTCT 1690921 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | |||| ||| || ||| ||| || ||||||||||| || || || ||||| ||| Sbjct 1690920 GACACTATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAGGGAATCCCACCAGACCAA 1690861 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | | || | ||| || || || || || ||| | ||| |||| || || ||| Sbjct 1690860 CAGCGTCTCATCTTTGCTGGCAAACAACTTGAGGATGGTCGCACTCTATCTGACTACAAT 1690801 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTA 156035 || |||||| | || | |||||||| ||| Sbjct 1690800 ATTCAGAAAGAGTCAACTTTGCATTTAGTATTA 1690768 Score = 102 bits (112), Expect = 1e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || |||||||| ||||| || || || || ||||| |||| ||| Sbjct 1690046 ATGCAGATCTTTGTCAAGACATTGACAGGAAAGACCATCACCTTGGAAGTGGAAGCTTCC 1689987 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | |||| ||| || || || || ||||| ||||||||||| |||||||| || Sbjct 1689986 GACACTATTGAAAATGTCAAGGCCAAGATTCAAGACAAAGAAGGCATTCCTCCAGATCAG 1689927 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | | || | ||| ||||| ||||| |||||| | || | || || || || Sbjct 1689926 CAGCGTCTTATCTTTGCTGGTAAACAGCTGGAAGATGGACGCACACTGTCTGACTACAAC 1689867 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGT 156031 || || ||| |||| ||||| || || Sbjct 1689866 ATCCAGAAGGAGTCGACTCTTCACTTGGT 1689838 Score = 100 bits (110), Expect = 4e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || | ||||| || || || || || || || |||| |||| Sbjct 1690752 ATGCAGATTTTTGTAAAGACTCTTACTGGTAAGACCATCACTTTGGAGGTTGAAGCTTCT 1690693 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || |||||| ||||| || || || ||||| || |||||||| ||| Sbjct 1690692 GATACCATTGAGAATGTGAAAGCCAAAATCCAGGACAAGGAAGGTATCCCTCCAGACCAA 1690633 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | | |||| ||| ||||||||| | || ||| | || | ||||||||||| Sbjct 1690632 CAGCGTCTAATTTTTGCTGGTAAGCAGTTGGAGGATGGACGTACACTCTCAGATTATAAC 1690573 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTG 156032 || || ||| | || || ||||| ||| Sbjct 1690572 ATTCAGAAGGAGTCAACCCTCCATTTGGTG 1690543 >seq336 Length=3726090 Score = 132 bits (146), Expect = 7e-26 Identities = 150/200 (75%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 155816 TAATAAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGA 155875 ||| |||||||| || ||| | ||||| |||||||| ||||||||||| || || ||||| Sbjct 1528576 TAACAAAATGCAGATCTTTGTCAAAACTTTGACTGGTAAAACTATTACCTTGGAGGTCGA 1528517 Query 155876 AGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCC 155935 || ||||||| |||| ||| || || ||||| |||||||| ||||| || ||||| Sbjct 1528516 AGCCTCTGATACTATTGAAAATGTCAAGGCCAAAATCCAAGATAAGGAAGGAATTCCTCC 1528457 Query 155936 AGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGA 155995 || || ||||||||||| | ||| || || || | |||||| | ||| | ||| Sbjct 1528456 GGATCAGCAAAGATTGATCTTTGCTGGAAAACAATTAGAAGATGGTCGTACTCTCCAAGA 1528397 Query 155996 TTATAATATATCCAAAGAGG 156015 ||| | | ||||||| ||| Sbjct 1528396 TTACA--ACATCCAAAAAGG 1528379 >seq123 Length=3260300 Score = 131 bits (144), Expect = 2e-25 Identities = 147/196 (75%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 |||||||| || ||| | ||||| || ||||| || || ||||| || ||||| |||| | Sbjct 712317 AAAATGCAGATCTTTGTCAAAACTTTAACTGGCAAGACCATTACTTTGGAAGTTGAAGCT 712258 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 ||||||| |||| ||| || ||| |||||| ||||| ||||| || || |||||||| Sbjct 712257 TCTGATACTATTGAAAATGTCAAAGCTAAAATCCAAGACAAAGAGGGAATTCCTCCAGAT 712198 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 || || || ||||| | || ||||| || | |||||| | ||| | ||||||| Sbjct 712197 CAGCAGAGGTTGATCTTCGCTGGTAAACAATTGGAAGATGGTCGCACTCTTCAAGATTAT 712138 Query 156000 AATATATCCAAAGAGG 156015 |||||| |||| ||| Sbjct 712137 AATATA--CAAAAAGG 712124 >seq222 Length=7060343 Score = 120 bits (132), Expect = 4e-22 Identities = 122/159 (77%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 || ||||| || ||| ||||||| |||||||| || || || || || || || || | Sbjct 1554051 AATATGCAGATTTTTGTTAAAACTTTGACTGGTAAGACCATCACCTTGGAGGTTGAGGCC 1553992 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 ||||| | |||| ||| || || |||||| || ||||||||||| || |||||||| Sbjct 1553991 TCTGACACTATTGAAAATGTCAAGGCTAAAATCCAGGATAAAGAAGGAATCCCTCCAGAT 1553932 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || ||||||||||| | ||||||||| || | |||||| Sbjct 1553931 CAGCAAAGATTGATCTTTGCCGGTAAACAATTGGAAGAT 1553893 >seq34 Length=2688268 Score = 114 bits (126), Expect = 2e-20 Identities = 350/541 (65%), Gaps = 16/541 (3%) Strand=Plus/Plus Query 18182 TCATCTCTGGATATTAATTCGTTACTAAACGTTAACCCGGGCATTATACCTCtttttttt 18241 ||||| | || |||| ||| || || || || | || ||||||| ||||| || || Sbjct 1149188 TCATCGCGAGAAATTAGTTCATTGCTGAAAGTAAGTCCTGGCATTAAACCTCGCTTCTTC 1149247 Query 18242 AGCCAAAATATCGATGCGAAACTACTAGAAAAGAATATACCCTCAACGCACGCGAACGCT 18301 | ||||||||| | || ||||||| | ||||| || || ||||| || || ||| Sbjct 1149248 AACCAAAATATGGCAGCAAAACTACCACTGAAGAAAATTCCTTCAACAGCTGCAAAAGCT 1149307 Query 18302 ATTAATCTTTCAGCAAAACTGTAT-----TTATTGCTCAGTATCCATTTTTGTGCCCATT 18356 || | || |||||||| |||| |||| || | |||| || ||||| | Sbjct 1149308 ATAACTCGCTCAGCAAA--TGTAGCACTCTTATGACTGA---TCCAGTTCATAGCCCAGT 1149362 Query 18357 CTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCATTAAACAAATCATCTTTTTCTT 18416 ||| | ||| |||| | | || || ||||| ||||| | || | | Sbjct 1149363 TAGCTTTCTTGGTAACACAAGGTAGAGTTTCAATTGCATTGAACAAGTAGTCCCTCTGAG 1149422 Query 18417 TGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGCTTTCCA 18476 | ||| | || || || || || | | ||||||||||| || || | |||||| Sbjct 1149423 ATGGATCAGTAATGTAGGTATCAATAAGAAGTGAATACATTTCTGAGTGCACATTTTCCA 1149482 Query 18477 TAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAA---TCTCGCTATAAA 18533 | |||| || || | ||| || | | |||||| | ||||| || ||| | Sbjct 1149483 TGGCTACTTGGAAGCCATAGAAGCAGCGAGCCTCAGTGACTTGAACTTCCTGGCT---GA 1149539 Query 18534 ATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAACAT 18593 ||| || || | ||| ||||| || || || |||| | || || ||||| || |||| Sbjct 1149540 ATCGCTCAACGAGATTTTCATTGACAATGCCATCAGAGGCAGCAAAGAATGCTAATACAT 1149599 Query 18594 ATTTAATGAAATGTTTTTCATTATCCTTGAGATTGTTCCATTCATCTATATCTTTTGATA 18653 ||| |||||||| || || || || | || ||| || | ||||| ||||||| Sbjct 1149600 GAGAAATAAAATGTTTCTCGTTGTCATTCAACTTTGCCCAATCGTGCATATCCTTTGATA 1149659 Query 18654 GATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGCCTGTTTGTACATTTTATAAATAT 18713 || |||||||| |||||||| || | || || | |||||||| | |||||| Sbjct 1149660 AGTCTACTTCTTCGACCGTCCAAAATGAAGCCTCAGCTTTCTTGTACATGTGCCAAATAT 1149719 Query 18714 C 18714 | Sbjct 1149720 C 1149720 >seq256 Length=3517054 Score = 113 bits (124), Expect = 7e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 ||||||||||| ||| | |||||| | || |||||||| || || | || || || | Sbjct 131014 AAAATGCAAATCTTTGTGAAAACACTCACAGGAAAAACCATCACCCTTGAGGTTGATGCG 130955 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 |||| | ||| ||| || || ||||| |||||||| ||||| || |||||||| Sbjct 130954 GCTGACAGCATTGAAAATGTCAAGGCCAAAATCCAAGATAAGGAAGGAATTCCTCCAGAC 130895 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 || ||||||||||| | ||||| || || | |||||| | || || || ||||| Sbjct 130894 CAGCAAAGATTGATCTTCGCCGGAAAACAATTGGAAGATGGACGTACATTGTCCGATTAC 130835 Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGT 156031 ||||| || || | || ||||||||||| Sbjct 130834 AATATTCAGAAGGAATCTACCCTTCATTTAGT 130803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731868734021200