Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq34 149 2e-30 seq1 109 2e-18 seq336 104 7e-17 seq89 100 8e-16 seq56 84.2 6e-11 >seq34 Length=2688268 Score = 149 bits (164), Expect = 2e-30 Identities = 365/540 (68%), Gaps = 10/540 (2%) Strand=Plus/Minus Query 133103 GAGATTTGGCAGATGTATAAAAAACAGCAAGATTTATTTTGGACT-TCAACTGAAGTAGA 133161 || |||||||| ||||| || ||| | | || ||||||||| || | |||||||| Sbjct 1149720 GATATTTGGCACATGTACAAGAAAGCTGAGGCTTCATTTTGGACGGTCGAA-GAAGTAGA 1149662 Query 133162 TTTATCCAAAGACCCAGCCCACTGGGAAGCCCTTACTGGGGATGAAAAACATTTTATTTC 133221 ||||| || || | | |||| | | | || | || |||||||||||||| Sbjct 1149661 CTTATCAAAGGATATGCACGATTGGGCAAAGTTGAATGACAACGAGAAACATTTTATTTC 1149602 Query 133222 T-ATGATTTTAGCGTTTTTTGCTGCGAGTGATGGTATTGTTCTTGAAAATTTAGGAACAC 133280 | ||| | ||||| || |||||||| |||||| ||||| ||||||| | | | Sbjct 1149601 TCATG-TATTAGCATTCTTTGCTGCCTCTGATGGCATTGTCAATGAAAATCTCGTTGAGC 1149543 Query 133281 GGTTTATGGGAGAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGA 133340 | || | ||||||||| | | || || || ||| ||||| | || | || | Sbjct 1149542 GATTCAGCCAGGAAGTTCAAGTCACTGAGGCTCGCTGCTTCTATGGCTTCCAAGTAGCCA 1149483 Query 133341 TGGAAAATATCCATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACCG 133400 |||||||| | || || | ||||| ||| |||||||| ||||| | ||| || Sbjct 1149482 TGGAAAATGTGCACTCAGAAATGTATTCACTTCTTATTGATACCTACATTACTGAT-CCA 1149424 Query 133401 TC-CAGAAGCACAAACTATTCAACGCCATTAGCGAAT-TTCCTTGTATTAAAAAGAAATC 133458 || |||| | || | | ||||| || ||| | | | | |||||| ||| |||||| | Sbjct 1149423 TCTCAGAGGGACTACTTGTTCAATGCAATT-GAAACTCTACCTTGTGTTACCAAGAAAGC 1149365 Query 133459 TGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGC 133518 | |||||||||| || |||||| | ||| |||| | |||||| || | | || Sbjct 1149364 TAACTGGGCTATGAACTGGATCAGTCATAAGAGTGCTACATTTGCTGAGCGAGTTATAGC 1149305 Query 133519 TTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCT-CTATTTTTTGGCTTA 133577 |||||| | || || || ||||| ||||||||| ||| |||| | || |||||| | | Sbjct 1149304 TTTTGCAGCTGTTGAAGGAATTTTCTTCAGTGGT-AGTTTTGCTGCCATATTTTGGTTGA 1149246 Query 133578 AAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGG 133637 | ||||| ||| | | || ||||| ||| || ||||| ||||| | || |||| Sbjct 1149245 AGAAGCGAGGTTTAATGCCAGGACTTACTTTCAGCAATGAACTAATTTCTCGCGATGAGG 1149186 >seq1 Length=8792355 Score = 109 bits (120), Expect = 2e-18 Identities = 189/272 (69%), Gaps = 6/272 (2%) Strand=Plus/Plus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| ||| ||||||||||||||||| ||||||||| | ||||||||||| ||| Sbjct 8394572 TCCATAGCCTTAATTAAACGACGCTGAATGTAACCAGTTTCGGCAGTTTTTACAGCAGTA 8394631 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT---AGC 302691 ||||| ||||| | ||||| ||||||||||| | |||| ||||| | || || Sbjct 8394632 TCAATAAGACCTTCGCGACCTCCCATAGCATG--AAAATA-AAATTCCGATGGTGTCAGT 8394688 Query 302692 CCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTA 302751 || | | | | || | || ||||| || | || || || |||| |||| | Sbjct 8394689 CCAGCTAAATAAGAATTTTCCACGAAGCCTTTGGATTCCGGACCATAGTCGTCCTTGATG 8394748 Query 302752 AAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGC 302811 || || |||| || | || | | || |||| || || || || || |||||||| Sbjct 8394749 AAATGGGGCAAAGTACGTTTACGAAAACCAAATGGTATTCGTTTACCTTCTACGTTCTGT 8394808 Query 302812 TGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 ||||| | ||| | ||| | || |||||||| Sbjct 8394809 TGTCCTACGCAAGCAATAACTTGAGAAATATT 8394840 >seq336 Length=3726090 Score = 104 bits (114), Expect = 7e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089 |||||||||||||| || |||||||| | | || || | ||||| || || ||| Sbjct 509533 CCAACAGCATCAATCTCATCAATGAACAAAATGCAAGGTGCATTTTTCCTAGCCTGCGCA 509474 Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149 || | ||||| || || |||| ||||| ||||||| ||||||| | |||||| || | Sbjct 509473 AACATATCTCTAACTCGAGATGGTCCAACACCAACAAACATTTCCAAAAATTCTGACCCA 509414 Query 289150 GATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTA 289209 || || | || | ||||| |||||| |||||| || |||| | | || ||| Sbjct 509413 GACACAGTCAGAAAAGGTACATCTGCTTCACCTGCTGTAGCTTTCGCTAACAAAGTTTTA 509354 Query 289210 CCTGTTCCAGGTGGTCC 289226 ||||||||||| || || Sbjct 509353 CCTGTTCCAGGGGGACC 509337 >seq89 Length=3244750 Score = 100 bits (110), Expect = 8e-16 Identities = 187/272 (69%), Gaps = 6/272 (2%) Strand=Plus/Plus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| ||| || | |||||||||||| ||||| ||| || ||||||||||| ||| Sbjct 2608606 TCCATAGCCTTTATAAGACGACGCTGAATGTAACCGGTTTCAGCGGTTTTTACAGCAGTA 2608665 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCC 302694 || || ||||| ||||||| |||||||| ||||| | | ||| ||| || || Sbjct 2608666 TCGATAAGACCTTCACGACCTCCCATAGCGTGGAAATAAAATTCTGATGGTGTAAGACCA 2608725 Query 302695 CCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CG-AATCGTCGAACTTGGTA 302751 ||| | | || | || || || || | || || || |||| || |||| | Sbjct 2608726 GCAAGATATGAATTTTCTACAAATCCTTTAGATTCAGGACCGTAATCATC---CTTGATG 2608782 Query 302752 AAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGC 302811 ||||| |||| || | || | || |||| ||||| || || ||||||||||| Sbjct 2608783 AAGTGAGGCAATGTGCGTTTGCGGAAACCAAATGGTATACGTTTACCTTCAACGTTCTGT 2608842 Query 302812 TGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 ||||| | || | ||| | || |||||||| Sbjct 2608843 TGTCCGACACAAGCAATAACTTGTGAAATATT 2608874 >seq56 Length=4197193 Score = 84.2 bits (92), Expect = 6e-11 Identities = 156/222 (70%), Gaps = 8/222 (4%) Strand=Plus/Minus Query 155571 ACAAACATACCAAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTG 155630 ||||||||| || | |||| || |||| |||||| || || || | | || | || Sbjct 1121073 ACAAACATATTAACAGCAATTGATGCCAAATTACAAACTGCCA-CTTCATCAGGT-GATG 1121016 Query 155631 --TATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGT 155688 || | ||||| |||| || | ||| ||| |||| ||||| ||||| | || | Sbjct 1121015 AGTACTGTACAACCTCAGTACATAAATTACTACTTCTGATTGTGCCCAAATTTTGTTGAT 1120956 Query 155689 TAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTG 155748 | ||||||| ||||||||||| ||||||| |||||||| ||||| || || | |||| Sbjct 1120955 TGGATTTACGATTACAAGCATCTTTGTATAACATGTATGGTGTTCCAGTTTCTACTTGTG 1120896 Query 155749 -CGTCCAGA-ATCTTTAGCCAGAGGTCACGGGCATTAATTTG 155788 | || | | | || | ||| | ||||| |||| |||||| Sbjct 1120895 ACATCAAAACAGCTGT--CCATAAATCACGAGCATCAATTTG 1120856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471810867814309