Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq314 203 4e-46 seq234 120 4e-21 seq156 111 2e-18 seq12 109 7e-18 seq347 98.7 1e-14 seq309 98.7 1e-14 seq298 96.9 4e-14 seq320 95.1 1e-13 >seq314 Length=7483177 Score = 203 bits (224), Expect = 4e-46 Identities = 323/457 (71%), Gaps = 10/457 (2%) Strand=Plus/Minus Query 1573779 CCGTGGATCGAAAAGTATCGCCCTATGGTGCTCGACGACATTGTCGGCAACGAGCACGCC 1573838 ||||||||||| ||||| || || | |||| ||||| |||||||||||| || | Sbjct 4929211 CCGTGGATCGAGAAGTACCGGCCGCAAAAGTTCGAGGACATCGTCGGCAACGAGGACACG 4929152 Query 1573839 GTCGCCTATCTCAGAGCGCTGGCTGCCGA---CGGCGACATGCCCAACCTCTTGCTGGCG 1573895 |||| | | | || || ||||| |||| || |||||| ||| | | || Sbjct 4929151 GTCG---AGCGCCTGTCGGTGTTCGCCGAGCACGGCAACGCGCCCAATCTCATCATAGCC 4929095 Query 1573896 GGTCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGTCTGGCGCGTGTCCTCTTGGGC 1573955 || || || ||| |||||| ||||||| |||| || | || || | ||| | ||| Sbjct 4929094 GGCCCACCGGGCGTGGGCAAAACCACGACCATCCTCTGCTTCGCCCGAATACTCCTTGGC 4929035 Query 1573956 GCGGCCGCCGACGAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGTC 1574015 | || | | || ||||||||||| |||||||| ||| ||||||||||| |||||||| Sbjct 4929034 CCCACCTTCAAGGACGCCGTGCTCGAGCTCAACGCCTCGAACGAGCGCGGCATCGACGTC 4928975 Query 1574016 GTGCGCAAGATCATCAAGCACCACGCCTCCAAGAGGATCGACCTGCCGCCCGGACGCCAC 1574075 |||||||| | |||||| |||| |||| | | || |||||||||| ||| Sbjct 4928974 GTGCGCAACAAGATCAAGATGTTCGCCCAGAAGAAGGTGAACTTGCCGCCCGGCAAGCAC 4928915 Query 1574076 AAGGTGATCATCCTCGACGAGGCCGACTGCCTCAC-GTCGGCGGCCCAGCAGGCCCTGCG 1574134 ||| | |||||||||||||||||||| || | || | |||| || |||||||| ||||| Sbjct 4928914 AAGATCATCATCCTCGACGAGGCCGATAGCATGACGGACGGC-GCTCAGCAGGCTCTGCG 4928856 Query 1574135 GTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAAC-ACGTCGT 1574193 |||||||| | ||| | ||||| | ||||| ||||| |||||| || || Sbjct 4928855 CCGTACCATGGAGATTTACAGTCAGACGACCAGATTTGCTCTGGCTTGCAACAACAGCG- 4928797 Query 1574194 CGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCAT 1574230 || ||||||| || | ||| |||||| ||||| Sbjct 4928796 AGAGAATCATCGAACCCATACAATCTCGCTGTGCCAT 4928760 Score = 95.1 bits (104), Expect = 1e-13 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 509089 CGAGATGTTTCTGCACATGATCGGCGGGCGCGAGGGCCTCGTCGACACGGCCGTCAAGAC 509148 |||| | || | |||| ||| || || |||||||| ||||||||||||||||||||||| Sbjct 6287716 CGAGTTCTTCTTCCACACGATGGGAGGTCGCGAGGGTCTCGTCGACACGGCCGTCAAGAC 6287775 Query 509149 GGCCGAGACGGGCTACATCCAGCGCCG 509175 |||||||| |||||||| ||||| || Sbjct 6287776 CGCCGAGACCGGCTACATGCAGCGACG 6287802 Score = 86.0 bits (94), Expect = 8e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 507735 CCTACAACGCCGACTTTGACGGCGACGAGATGAACCTGCACGTGCCCCAGTCCGAGACGG 507794 |||||||||| ||||| ||||||||||||||||| |||||| |||| ||| |||| || Sbjct 6286668 CCTACAACGCGGACTTCGACGGCGACGAGATGAATCTGCACTTGCCGCAGACCGAAGAGG 6286727 Query 507795 CGCGCGCCGAGG 507806 | |||||||||| Sbjct 6286728 CTCGCGCCGAGG 6286739 >seq234 Length=2749388 Score = 120 bits (132), Expect = 4e-21 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| || || | || ||||| |||||||| || | | || Sbjct 916465 GCTTGGCCAGCTCACCGGGCAAGAGGAGCCTGACAGCGGTTTGGATCTCCCGGGAGGTGA 916524 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || | |||||| |||| ||||||||| ||| |||| | ||||||| |||| | Sbjct 916525 TGGTCGACCTCTTGTTGTAGTGAGCCAGACGGGAGGCTTCGGCGGCGATGCGCTCGAAGA 916584 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||| ||| | |||| ||| | || ||| |||| Sbjct 916585 TGTCGTTGACAAAGCTGTTCATGATGCTCATGGCCTTGGAGGATACTCCGGTGTCTGGGT 916644 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||| | |||||||||||| Sbjct 916645 GAACCTGCTTCAAGACCTTGTAGATG 916670 >seq156 Length=5073579 Score = 111 bits (122), Expect = 2e-18 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || ||| | ||| | |||||||| |||||||| || | | || Sbjct 3480052 GCTTGGCGAGCTCACCAGGCAACAGCAGCCTGACGGCGGTTTGGATCTCCCGGGAGGTGA 3479993 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || | |||||| |||| |||| || |||||||| | |||| || |||| | Sbjct 3479992 TGGTCGATCTCTTGTTGTAGTGAGCCAAGCGCGAGGCCTCGGCGGCGATACGCTCGAAGA 3479933 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||| ||| | |||| ||| | || |||||||| Sbjct 3479932 TGTCGTTGACAAAGCTGTTCATGATGCTCATGGCCTTGGAGGATACTCCGGTGTCGGGGT 3479873 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||| || |||||||||||| Sbjct 3479872 GGACCTGCTTCAGGACCTTGTAGATG 3479847 Score = 107 bits (118), Expect = 2e-17 Identities = 121/162 (75%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 509089 CGAGATGTTTCTGCACATGATCGGCGGGCGCGAGGGCCTCGTCGACACGGCCGTCAAGAC 509148 |||| | || | |||| ||| ||||| |||||||| ||||||||||||||||||||||| Sbjct 3924027 CGAGTTCTTCTTCCACACGATGGGCGGTCGCGAGGGTCTCGTCGACACGGCCGTCAAGAC 3924086 Query 509149 GGCCGAGACGGGCTACATCCAGCGCCGGTGCATCAAGTCGATGGAGAGCCTGCAGATCAA 509208 ||||||||| |||||||| ||||| || | ||||| ||||| ||| | | | Sbjct 3924087 GGCCGAGACCGGCTACATGCAGCGACGTCTCGTCAAGAGCTTGGAGGATCTGGTGCTTCA 3924146 Query 509209 GCGCGGCGGCCTCGTGCGCAACGCCAACGGCGACATCGTCCA 509250 || | ||||||||||||| |||||| ||||||| Sbjct 3924147 TTACGACATGACCGTGCGCAACGCCGTCGGCGATCTCGTCCA 3924188 Score = 100 bits (110), Expect = 3e-15 Identities = 148/207 (71%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | || | ||||| || |||||||| || | || Sbjct 4871854 GCTTGGCCAGCTCTCCCGGCAACAGAAGTCTGACGGCCGTTTGGATCTCCCGAGACGTGA 4871913 Query 1254403 TCGTGTTGCGCTTGTTCGAGT--GC-GCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459 | ||| ||| ||||||| || || |||||| |||||| ||| ||||||| |||| Sbjct 4871914 TGGTGGA---CTTTTTCGAGTAGGCAGCGAGACGGGAGGCCTCCGTGGCGATGCGCTCGA 4871970 Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519 ||||||||||| || |||||||| ||| | |||| ||||| || ||| | Sbjct 4871971 AGATGTCGTTGACCAAACTGTTCATGATGCTCATGGCCTTGGAGGAGACACCGGTGTCTG 4872030 Query 1254520 GGTGCACCTGCTTGAGCACCTTGTAGA 1254546 |||| |||||||| || |||||||||| Sbjct 4872031 GGTGAACCTGCTTCAGGACCTTGTAGA 4872057 Score = 86.0 bits (94), Expect = 8e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 507735 CCTACAACGCCGACTTTGACGGCGACGAGATGAACCTGCACGTGCCCCAGTCCGAGACGG 507794 |||||||||| ||||| ||||||||||||||||| |||||| |||| ||| |||| || Sbjct 3922979 CCTACAACGCGGACTTCGACGGCGACGAGATGAATCTGCACTTGCCGCAGACCGAAGAGG 3923038 Query 507795 CGCGCGCCGAGG 507806 | |||||||||| Sbjct 3923039 CCCGCGCCGAGG 3923050 >seq12 Length=6468222 Score = 109 bits (120), Expect = 7e-18 Identities = 167/237 (70%), Gaps = 6/237 (3%) Strand=Plus/Minus Query 92586 GCCTCGCCGATGCACTCGGCGATCTGGCGCGTGAGGGCCTCCTGCACCTGGAAGCGGTCG 92645 |||||| | | | |||||||||||| || ||| |||||| ||||| | || Sbjct 4866785 GCCTCGACCACGGCCTCGGCGATCTGCTTGGTCAGGCGCTCCTGGACCTGCATTCGCCTC 4866726 Query 92646 GAAAACATGTCGACGATGCGCGGGATCTTGCTCAGGCCGATGATCCTGCCCGTG---GGC 92702 || || || ||||||||||| | | |||||| ||||||| |||| | | || ||| Sbjct 4866725 GAGAATATCTCGACGATGCGGGCCAGCTTGCTGAGGCCGAGGATCTT---CTTGCAAGGC 4866669 Query 92703 AGGTAGCCCACGTGGGCCTTGCCCATAAAGGGCAGCAGATGGTGCTCGCACATGGAGAAA 92762 || ||||| | | ||||||| || |||| ||||||||||||||||||||||| Sbjct 4866668 AGATAGCCGATGGACACCTTGCCGTAGAACGGCACGAGATGGTGCTCGCACATGGAGAAC 4866609 Query 92763 AAGTCGACGTCGCGCACGATCACCATCTCGCCCGAGGCCTCGGCAAAGAGCGCGTCG 92819 | |||| ||| || | ||||||||| | | ||||| | |||| ||||||| Sbjct 4866608 ATCTCGATGTCCTTGACCACGACCATCTCGTCGTGGTCCTCGTCGAAGATCGCGTCG 4866552 >seq347 Length=8643572 Score = 98.7 bits (108), Expect = 1e-14 Identities = 116/155 (75%), Gaps = 3/155 (2%) Strand=Plus/Minus Query 733152 GAGGACATGCCCTGGTCGCCGCGCGGCGGCGCCACGCCCGACATCGTGATCAACCCGCAC 733211 ||||||||||| | || | | ||| ||| || || ||| | | ||||| |||||| Sbjct 5130517 GAGGACATGCCGT--TCAC-GAGCGAGGGCATAACTCCGGACGTGATCATCAATCCGCAC 5130461 Query 733212 GCCATCCCGTCGCGCATGACCATGGGCAAGATGCTCGAGGCCCTCCTGGGCAAGGTGGCC 733271 ||||| |||||||||||||| || ||| | || ||||| | ||| |||||||||| | Sbjct 5130460 GCCATACCGTCGCGCATGACGATCGGCCATCTGATCGAGTGCATCCAGGGCAAGGTGTCG 5130401 Query 733272 TGCCGCGAGGGCTACATCGGCGACGGCACGCCCTT 733306 | | ||||| | |||||||||| ||||||||| Sbjct 5130400 GCCAACAAGGGCGAGATCGGCGACGCCACGCCCTT 5130366 Score = 96.9 bits (106), Expect = 4e-14 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || ||| ||| | |||||| || || || |||||||| || | | || Sbjct 2465973 GCTTGGCGAGCTCACCGGGCAACAGCAGGCGGACAGCAGTTTGGATCTCCCGGGAGGTGA 2466032 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| |||| |||| ||| || |||| | ||||||| || | | Sbjct 2466033 TGGTCGATCGCTTGTTGTAGTGAGCCAAGCGGGAAGCTTCGGCGGCGATGCGCTCAAAGA 2466092 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| ||||| || |||||||| ||| | |||| ||| | || ||| |||| Sbjct 2466093 TGTCATTGACGAAGCTGTTCATGATGCTCATGGCCTTGGAGGACACACCGGTGTCAGGGT 2466152 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||| | |||||||||||| Sbjct 2466153 GGACCTGCTTCAAGACCTTGTAGATG 2466178 Score = 87.8 bits (96), Expect = 2e-11 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || ||||| ||| | |||||| || || || |||||||| || | | || Sbjct 2063805 GCTTGGCGAGCTCGCCAGGCAACAGCAGGCGGACAGCAGTTTGGATCTCCCGGGAGGTGA 2063864 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || | |||||| |||| |||| ||| || |||| | ||||||| || | | Sbjct 2063865 TGGTCGATCTCTTGTTGTAGTGAGCCAAGCGGGAAGCTTCGGCGGCGATGCGCTCAAAGA 2063924 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| ||||| || |||||||| ||| | |||| ||| | || ||| || | Sbjct 2063925 TGTCATTGACGAAGCTGTTCATGATGCTCATGGCCTTGGAGGACACACCGGTGTCAGGAT 2063984 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||| | |||||||||||| Sbjct 2063985 GGACCTGCTTCAAGACCTTGTAGATG 2064010 >seq309 Length=776216 Score = 98.7 bits (108), Expect = 1e-14 Identities = 146/204 (72%), Gaps = 6/204 (3%) Strand=Plus/Plus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || ||| |||||| || | ||||| ||||||||||| | || | | Sbjct 208719 TGGCCAGCTCTCCGGGCATGAGAAGTCTGACGGCCGTCTGGATCTC---CATGGAGGTGA 208775 Query 1254406 TGTTGCGCTTGTTCGAGT--GC-GCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 || | ||| || |||| || || ||||| |||||| ||| ||||||| |||| | Sbjct 208776 TGGTCGACTTTTTGGAGTAGGCAGCGAGACGCGAGGCCTCCGTGGCGATGCGCTCGAAGA 208835 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||| ||| || |||||||| ||| | | || ||||| ||||| ||||| | Sbjct 208836 TGTCGAAGACCAAATTGTTCATGATGCCCATGGCCCTGGAGGAGACGCCCAGGTCGGCAT 208895 Query 1254523 GCACCTGCTTGAGCACCTTGTAGA 1254546 | ||||||||||| || ||||||| Sbjct 208896 GGACCTGCTTGAGGACTTTGTAGA 208919 >seq298 Length=2495523 Score = 96.9 bits (106), Expect = 4e-14 Identities = 167/244 (68%), Gaps = 12/244 (5%) Strand=Plus/Plus Query 509075 GGCCTCAACTCGCGCGAGATGTTTCTGCACATGATCGGCGGGCGCGAGGGCCTCGTCGAC 509134 ||||||| || |||| | || | |||| ||| | ||| | |||||||| || ||| Sbjct 1466001 GGCCTCAGTCCGACCGAGTTCTTCTTTCACACGATGGCCGGTAGAGAGGGCCTGGTGGAC 1466060 Query 509135 ACGGCCGTCAAGACGGCCGAGACGGGCTACATCCAGCGCCGGTGCATCAAGTCGATGGA- 509193 |||||||| |||||||||||||| |||||||| |||||| || | ||||| |||| Sbjct 1466061 ACGGCCGTGAAGACGGCCGAGACCGGCTACATGCAGCGCAGGCTCGTCAAGAGTCTGGAG 1466120 Query 509194 -----GAGCCTGCAGATCAAGCGCGGCGGCCTCGTGCGCAACGCCAACGGCGACATCGTC 509248 | ||||||| | | | | || ||||||||| || ||||||||||| Sbjct 1466121 GATCTGTGCCTGCACTACGA-CATGACG-----GTGCGCAACTCCGTGGGCGACATCGTG 1466174 Query 509249 CAGTTTGCCTATGGCGGCGACGGNNNNNNCGCCACCTACATCGAGCGCGTGCGCTGCCGC 509308 ||| ||| |||||||||| | ||| |||||| ||| || | ||||| | Sbjct 1466175 CAGGAGCTCTACGGCGGCGACGCCATGGACCCCAGCTACATGGAGGGCAAGGACTGCCCC 1466234 Query 509309 GAGG 509312 | || Sbjct 1466235 GTGG 1466238 >seq320 Length=1615902 Score = 95.1 bits (104), Expect = 1e-13 Identities = 145/204 (71%), Gaps = 6/204 (3%) Strand=Plus/Plus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || ||| |||||| || | ||||| ||||||||||| | || | | Sbjct 209290 TGGCCAGCTCTCCGGGCATGAGAAGTCTGACGGCCGTCTGGATCTC---CATGGAGGTGA 209346 Query 1254406 TGTTGCGCTTGTTCGAGT--GC-GCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 || | ||| || || | || || ||||| |||||| ||| ||||||| |||| | Sbjct 209347 TGGTCGACTTTTTGGAATAGGCAGCGAGACGCGAGGCCTCCGTGGCGATGCGCTCGAAGA 209406 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||| ||| || |||||||| ||| | | || ||||| ||||| ||||| | Sbjct 209407 TGTCGAAGACCAAATTGTTCATGATGCCCATGGCCCTGGAGGAGACGCCCAGGTCGGCAT 209466 Query 1254523 GCACCTGCTTGAGCACCTTGTAGA 1254546 | ||||||||||| || ||||||| Sbjct 209467 GGACCTGCTTGAGGACTTTGTAGA 209490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107109902908169