Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq89 113 4e-20 >seq89 Length=3244750 Score = 113 bits (124), Expect = 4e-20 Identities = 164/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || |||||||| || || ||||| || ||||| ||| | ||| ||| ||| | Sbjct 1690046 ATGCAGATCTTTGTCAAGACATTGACAGGAAAGACCATCACCTTGGAAGTGGAAGCTTCC 1689987 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| | | | || || |||||| || ||||||||| | || |||||| Sbjct 1689986 GACACTATTGAAAATGTCAAGGCCAAGATTCAAGACAAAGAAGGCATTCCTCCAGATCAG 1689927 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGA----GGACGCCAAAACAATGGCGGACTA 107731 ||| | ||||| | ||| |||||||||||||| |||||| ||| || | ||||| Sbjct 1689926 CAGCGTCTTATCTTTGCTGGTAAACAGCTGGAAGATGGACGC----ACACTGTCTGACTA 1689871 Query 107732 CAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||||| || |||||||| || | ||| |||| || | |||| || || Sbjct 1689870 CAACATCCAGAAGGAGTCGACTCTTCACTTGGTTCTGCGTCTGCGTGGTGG 1689820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398875064511973