Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq222 95.1 2e-14 seq45 95.1 2e-14 >seq222 Length=7060343 Score = 95.1 bits (104), Expect = 2e-14 Identities = 68/77 (88%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 11725 CCCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTC 11783 || |||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| Sbjct 3602824 CCAAGTCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTC 3602883 Query 11784 GATTCCCCGACGAGGAG 11800 ||||||||| || |||| Sbjct 3602884 GATTCCCCGCCGGGGAG 3602900 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 3602829 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 3602888 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 3602889 CCCGCCGGGGAG 3602900 Score = 89.7 bits (98), Expect = 7e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410 |||||| || |||||| |||||||||||||||||| | |||| |||||||| | ||||| Sbjct 3602902 AACTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 3602843 Query 139411 TATACTAACGAGGATTT 139427 ||||||| |||||| || Sbjct 3602842 TATACTACCGAGGACTT 3602826 >seq45 Length=4254430 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 4043567 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 4043508 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 4043507 CCCGCCGGGGAG 4043496 Score = 93.3 bits (102), Expect = 6e-14 Identities = 65/73 (89%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||||| Sbjct 4043567 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 4043508 Query 11789 CCCGACGAGGAGG 11801 |||| || ||||| Sbjct 4043507 CCCGCCGGGGAGG 4043495 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 4043496 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 4043555 Query 139413 TACTAACGAGGATTT 139427 ||||| ||||||||| Sbjct 4043556 TACTACCGAGGATTT 4043570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652841886680080