Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_024451.1 Length=220222 Score E Sequences producing significant alignments: (Bits) Value seq318 86.0 9e-12 >seq318 Length=1477034 Score = 86.0 bits (94), Expect = 9e-12 Identities = 122/172 (71%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 140556 GATCAACGCGGGTCTCCCGCATATATTTCTCCGGATGTTATCAGCGGTAAACCATATTTA 140615 || ||| | || || || || |||||| |||| || ||| | || |||| ||| Sbjct 578804 GACCAAAGAGGATCGCCTGCCTATATTGCTCCTGAAGTTTTGTCTGGAAAACATTATGCT 578863 Query 140616 GGTAAACCGTCTGATATGTGGGCGCTTGGAGTAACATTGTATACCATGTTGTTTGGGCAA 140675 |||||||| ||||||||||||| | ||||| | ||||| || ||| ||| || ||| Sbjct 578864 GGTAAACCTGCTGATATGTGGGCTTTGGGAGTCATGTTGTACACAATGCTGTACGGACAA 578923 Query 140676 TTTCCATTTTATGATGCGTCTCCAACAGAGCTCTTTAGAAAAATAAAGTCAG 140727 |||||||| ||||| ||||| | ||||| || | |||| || |||| Sbjct 578924 TTTCCATTCTATGAAAACACTCCATCTGAGCTGTTCAATCAAATCAAATCAG 578975 Score = 86.0 bits (94), Expect = 9e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 127428 GAGGATCACCGGCATACATCTCCCCAGAAGTTATATCAGGTAAAAAATATTTAGCAAAAC 127487 ||||||| || || || || | || |||||| | || || ||| | ||| | |||| Sbjct 578811 GAGGATCGCCTGCCTATATTGCTCCTGAAGTTTTGTCTGGAAAACATTATGCTGGTAAAC 578870 Query 127488 CGTCAGATGTTTGGGCTATAGGAGTTATTTTTTATACAATGCTTTACGGACAATTTCCAT 127547 | | ||| | |||||| | ||||| || || || |||||||| |||||||||||||||| Sbjct 578871 CTGCTGATATGTGGGCTTTGGGAGTCATGTTGTACACAATGCTGTACGGACAATTTCCAT 578930 Query 127548 TTTATGA 127554 | ||||| Sbjct 578931 TCTATGA 578937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 704579255801040