Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq89 104 2e-17 seq296 100 3e-16 >seq89 Length=3244750 Score = 104 bits (114), Expect = 2e-17 Identities = 151/208 (73%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | || ||||| || || |||||||| || || ||| ||| ||| || || Sbjct 1691459 AAATGCAGTGTCGACTCCTTTTGAATATTGTAGTCTGACAAAGTGCGACC-GTCTTCAAG 1691517 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| || || ||| ||||||| ||||| || || || || || ||||| ||||| ||| Sbjct 1691518 CTGTTTTCCGGCGAAAATGAGACGCTGTTGATCTGGGGGAATTCCTTCTTTGTCT-TGAA 1691576 Query 133574 CTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||| || || | | |||| ||||||| || || || || | |||| |||||| | Sbjct 1691577 TTTTGGCCTTCACGTTTTCAATTGTGTCGGAGGCTTCGACCTCAAGTGTGATGGTTTTAC 1691636 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | ||||||||||| || ||||| ||||| Sbjct 1691637 CTGTCAGAGTTTTGACAAAAATTTGCAT 1691664 Score = 102 bits (112), Expect = 8e-17 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTGC 133521 || |||||||| || |||||||| || || | | |||| ||||| || ||||||| Sbjct 1689622 GTAGACTCTTTTTGGATATTGTAGTCTG--ATAGAGTACGACCATCCTCAAGTTGCTTGC 1689679 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || |||| | ||||||||||| |||||||| ||||||||||| |||||| | Sbjct 1689680 CAGCAAAAATCAAACGCTGCTGGTCTGGAGGGATACCTTCCTTGTCCTGGATCTTGGCTT 1689739 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||||| || || | | || || || | |||| ||| || || || |||| Sbjct 1689740 TTACATTCTCAATGGTATCAGAAGCTTCAACCTCCAATGTGATGGTCTTACCAGTAAGAG 1689799 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || ||||||||||| Sbjct 1689800 TCTTAACAAAAATCTGCAT 1689818 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/209 (72%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGA 133512 ||||| | ||| ||||| ||||| || || ||||| | ||| ||| ||||| | Sbjct 1690547 AAATGGAGGGTTGACTCCTTCTGAATGTTATAATCTGAGA--GTGTACGTCCATCCTCCA 1690604 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 |||||| || || |||| || ||||| ||||| |||||||| ||||||||||| || Sbjct 1690605 ACTGCTTACCAGCAAAAATTAGACGCTGTTGGTCTGGAGGGATACCTTCCTTGTCCTGGA 1690664 Query 133573 TCTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631 | ||| || || | | ||||| || || | | || || || | |||| ||| || Sbjct 1690665 T-TTTGGCTTTCACATTCTCAATGGTATCAGAAGCTTCAACCTCCAAAGTGATGGTCTTA 1690723 Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || ||||| ||||| ||||||||||| Sbjct 1690724 CCAGTAAGAGTCTTTACAAAAATCTGCAT 1690752 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | |||||||||||| || ||||| || || || ||| ||| | || || | Sbjct 1691231 AAGTGGAGGGTGGACTCTTTTTGAATATTATAGTCCGACAATGTGCGACCA-TCTTCCAA 1691289 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || || |||| | |||||||| || || ||||| ||||| ||||| ||| Sbjct 1691290 CTGCTTACCAGCAAAAATTAAACGCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGGAT 1691349 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | |||| ||||| | || ||| || || | || | |||||| || Sbjct 1691350 CTTGGCCTTGACATTTTCAATTGTGTCTGAGGCCTCGACTTCCAAAGTAATGGTTTTACC 1691409 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATGGCT 133664 |||| ||||| || || || |||||| || Sbjct 1691410 AGTCAATGTTTTAACAAAGATTTGCATGCCT 1691440 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | || ||||||||||| |||||||| || | ||| ||| | ||||| || Sbjct 1690775 AAATGCAAAGTTGACTCTTTCTGAATATTGTAGTCAGATAGAGTGCGACCA-TCCTCAAG 1690833 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 || ||||| || | ||||| ||||| ||||| || ||||| || || || || || Sbjct 1690834 TTGTTTGCCAGCAAAGATGAGACGCTGTTGGTCTGGTGGGATTCCCTCTTTATCTTGAAT 1690893 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| |||| | |||| ||||| | | || || || | |||| || ||||| Sbjct 1690894 CTTAGCTTTGACATTTTCAATAGTGTCAGAAGCTTCAACCTCCAATGTGATAGTCTTGCC 1690953 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 |||||||| || || |||||||||||| Sbjct 1690954 AGTCAGAGTCTTGACAAAAATCTGCATG 1690981 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| || ||||| || || ||||| || ||| | | | || ||||||||||| || Sbjct 1691924 GTGGATTCCTTCTGAATGTTATAATCAGACAAGGTGCGTCCA-TCTTCGAGCTGCTTTCC 1691982 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || | | ||||||||| || |||||||| || ||||| |||||| ||| Sbjct 1691983 TGCAAAGATCAATCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGAATCTTTGCCTT 1692042 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| ||||||| | ||| || || | |||| |||||| || ||||| || Sbjct 1692043 AACATTTTCAATGGTGTCGGATGCCTCGACCTCCAATGTGATGGTTTTACCAGTCAGCGT 1692102 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 1692103 CTTCACAAAGATCTGCAT 1692120 >seq296 Length=2599778 Score = 100 bits (110), Expect = 3e-16 Identities = 168/240 (70%), Gaps = 6/240 (3%) Strand=Plus/Plus Query 20258 GCGCG--GTACGGGTAATCAATCTCCTGCTCCACGCCGCCCATGTTCATGATCTGCTCGT 20315 ||||| |||||| || || ||| |||| | |||||||| | | ||| | || Sbjct 2458744 GCGCGTCGTACGGATAGTCGGACTCGAGCTCGAGGCCGCCCAGCTCCTCGATGGCCCGGT 2458803 Query 20316 AGGCCGTGTGGATGAGCCCGCCGTTGCAACCCATGTCCACCGTGTCGCAGTCCACCAGCT 20375 ||||| | | || || |||||||| || ||| | | ||||||||| || |||| Sbjct 2458804 AGGCCTGATCGGGCAGACCCCCGTTGCAGCCGTCGTCGAGCTGGTCGCAGTCGACGAGCT 2458863 Query 20376 GTTGCTCGCTCAAATCGAC--CAGACGGTCGTACTTGATGGCGTACTGGCTCTCGAGCGC 20433 |||||||| | |||| ||| || ||| ||||||||||||||||| ||||| Sbjct 2458864 CCTGCTCGCTGAG--CGACAGCAGCTGGCCGTGCTTGATGGCGTACTGGCCCTCGACGTT 2458921 Query 20434 GCCCAGGCCCGCAAACGCCCAGCACGCGCCGCACATGCGCTGGTCCTTGACCGAGGTGAC 20493 |||| ||| ||||||||||||| ||||||| || ||| | ||| |||| ||| || Sbjct 2458922 GCCCGTCACCGAGAACGCCCAGCACGAGCCGCACTGGCCCTGATTCTTCACCGGGGTCAC 2458981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483418642734680