Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq89 127 5e-24 seq1 107 5e-18 >seq89 Length=3244750 Score = 127 bits (140), Expect = 5e-24 Identities = 135/174 (78%), Gaps = 8/174 (5%) Strand=Plus/Minus Query 305323 TGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAA 305382 ||||| || | || ||| ||||||| | || || |||||| |||||||| ||| | Sbjct 2609935 TGATTTAGTAATATTTAATCGGCAACCTACTCTTCACAAAATGAGTATGATGGGTCACAG 2609876 Query 305383 AGTCAAAGTATTATC-TGGATTGACATTTCGATTAAATGTAAGTGCTTGTACG---CCTT 305438 ||||||||| || | |||| | ||||| || | ||| ||||| |||||| |||| Sbjct 2609875 AGTCAAAGTCTTGCCATGGAGT-ACATTCCGGATGAATTTAAGT---TGTACGTCACCTT 2609820 Query 305439 ATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCAAAGG 305492 | ||||| |||||||||||||||||||||||| |||||||||| ||||||| || Sbjct 2609819 ACAATGCAGATTTTGATGGAGATGAAATGAATTTGCATGTACCACAATCAATGG 2609766 >seq1 Length=8792355 Score = 107 bits (118), Expect = 5e-18 Identities = 130/172 (76%), Gaps = 4/172 (2%) Strand=Plus/Minus Query 305323 TGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAA 305382 ||||| ||| | |||||| | ||||| | || || |||||| |||||||| |||| Sbjct 8396473 TGATTTAGTTATTTTCAATCGCCAACCCACTCTTCACAAAATGAGTATGATGGGCCATAG 8396414 Query 305383 AGTCAAAGTATTATCT-GGATTGACATTTCGATTAAATGTAAGT-GCTTGTACGCCTTAT 305440 ||||||||| ||| || ||| | || || || | ||| ||||| || | |||||||| Sbjct 8396413 AGTCAAAGTTTTACCTTGGAGT-ACGTTCCGTATGAATTTAAGTTGCACCT-CGCCTTAT 8396356 Query 305441 AATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCAAAGG 305492 || || || || ||||| || |||||||| |||| ||||||||||||| || Sbjct 8396355 AACGCCGACTTCGATGGGGACGAAATGAACTTGCACGTACCTCAATCAATGG 8396304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186807371444077