Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq89 131 1e-25 seq256 102 5e-17 seq123 89.7 3e-13 seq336 86.0 4e-12 seq222 82.4 5e-11 >seq89 Length=3244750 Score = 131 bits (144), Expect = 1e-25 Identities = 175/240 (73%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||| | | ||| | ||||| || ||||| ||||||||| ||| Sbjct 1690970 AAAATCTGCATGCCACCACGAAGACGCAGAACCAAGTGAAGAGTTGACTCTTTTTGGATG 1691029 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 || ||||| || | |||||| | || ||||||||||| || |||||||| ||||||||| Sbjct 1691030 TTATAATCTGACAATGTGCGACCATCTTCCAATTGTTTACCAGCAAAAATTAAACGCTGC 1691089 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || ||| | || | ||||||||||| |||||| |||| |||| || | ||||| Sbjct 1691090 TGGTCTGGAGGGATGCCTTCTTTGTCCTGAATTTTAGCTTTC-ACATTTTCAATTGTGTC 1691148 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || ||| || |||| || || ||||| || || | || || ||||| || ||||| Sbjct 1691149 AGATGCTTCGACTTCAAGAGTTATAGTTTTTCCAGTGAGGGTCTTGACAAAAATTTGCAT 1691208 Score = 129 bits (142), Expect = 4e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | ||||| || ||||| ||| || || |||||||| || || Sbjct 1689819 ACCACCACGCAGACGCAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCAGA 1689878 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||||||||| | || |||| ||||| || ||||| || | ||||||||||||| | || Sbjct 1689879 CAGTGTGCGTCCATCTTCCAGCTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGG 1689938 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| ||| || | | |||| || | |||||| | ||||| Sbjct 1689939 AATGCCTTCTTTGTCTTGAATCTT-GGCCTTGACATTTTCAATAGTGTCGGAAGCTTCCA 1689997 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || || ||||| || || || ||||||||||||||| Sbjct 1689998 CTTCCAAGGTGATGGTCTTTCCTGTCAATGTCTTGACAAAGATCTGCATA 1690047 Score = 122 bits (134), Expect = 6e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||| | ||| || || ||||| || || ||| ||||| || ||||| || || Sbjct 1691438 CCTCCTCTAAGACGCAATACTAAATGCAGTGTCGACTCCTTTTGAATATTGTAGTCTGAC 1691497 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | ||||| |||| || | ||||||||||| ||||| | |||||| |||||| | || Sbjct 1691498 AAAGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAAATGAGACGCTGTTGATCTGGGGGA 1691557 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||||||||| |||||| ||| || | || | |||||| | ||| || Sbjct 1691558 ATTCCTTCTTTGTCTTGAATTTTGGCCTTC-ACGTTTTCAATTGTGTCGGAGGCTTCGAC 1691616 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 |||| ||||| ||||||||||| | ||||| ||||| || |||||| Sbjct 1691617 CTCAAGTGTGATGGTTTTACCTGTCAGAGTTTTGACAAAAATTTGCATA 1691665 Score = 109 bits (120), Expect = 4e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | | || | || || ||| || || || ||||| ||||| || Sbjct 1691893 ACCACCTCTCAATCTGAGTACAAGGTGGAGTGTGGATTCCTTCTGAATGTTATAATCAGA 1691952 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | |||||| | || || | || ||||| ||||| ||||| | |||||| ||| | || Sbjct 1691953 CAAGGTGCGTCCATCTTCGAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGGTCTGGGGG 1692012 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || |||||||| ||| || || | ||||| || | ||||||| || || | Sbjct 1692013 GATGCCCTCTTTGTCTTGAATCTT-TGCCTTAACATTTTCAATGGTGTCGGATGCCTCGA 1692071 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| |||||||| || | ||| || |||||||||||||| Sbjct 1692072 CCTCCAATGTGATGGTTTTACCAGTCAGCGTCTTCACAAAGATCTGCAT 1692120 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || ||| | ||||| || || ||| ||||||||| || || || || || Sbjct 1691210 CCACCACGCAGACGGAGTACCAAGTGGAGGGTGGACTCTTTTTGAATATTATAGTCCGAC 1691269 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | |||||| | || ||||| || || || |||||||| ||||||||||||||| | || Sbjct 1691270 AATGTGCGACCATCTTCCAACTGCTTACCAGCAAAAATTAAACGCTGCTGATCTGGTGGG 1691329 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||||||||| || || | | |||| || | ||||| | || || Sbjct 1691330 ATTCCTTCTTTGTCTTGGATCTT-GGCCTTGACATTTTCAATTGTGTCTGAGGCCTCGAC 1691388 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | || || |||||||| || || ||||| |||||||| ||||| Sbjct 1691389 TTCCAAAGTAATGGTTTTACCAGTCAATGTTTTAACAAAGATTTGCAT 1691436 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| |||||||| | | || | ||| || ||| ||||| || ||||||||||| || Sbjct 1691665 ACCTCCTCTCAATCTGAGTACAAGATGCAGTGTGGATTCTTTCTGAATGTTGTAATCTGA 1691724 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || |||||| | || |||||||||||||| ||||| ||||| | |||||||||| | || Sbjct 1691725 CAGAGTGCGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTCTGCTGATCTGGTGG 1691784 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || || || |||||| | | ||||| || | || || || || | Sbjct 1691785 AATTCCCTCCTTATCTTGAATTTT-GGCCTTAACATTCTCAATAGTATCTGAAGACTCAA 1691843 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| || || || || || || | || || |||||||| |||||| Sbjct 1691844 CCTCAAGGGTAATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCATA 1691893 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | |||||| || || || || || ||||||||| || ||||| || || Sbjct 1689592 CCACCCCGGAGACGTAATACTAAGTGAAGTGTAGACTCTTTTTGGATATTGTAGTCTGAT 1689651 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || || | ||| || || |||||||||||||||||||| ||| | || Sbjct 1689652 AGAGTACGACCATCCTCAAGTTGCTTGCCAGCAAAAATCAAACGCTGCTGGTCTGGAGGG 1689711 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||| ||||| || || | || |||| || | ||| || | ||| || Sbjct 1689712 ATACCTTCCTTGTCCTGGATCTT-GGCTTTTACATTCTCAATGGTATCAGAAGCTTCAAC 1689770 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||||| || ||||| || | || || ||||| ||||||||| Sbjct 1689771 CTCCAATGTGATGGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCATA 1689819 >seq256 Length=3517054 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | || ||| | || ||||| || || || || || || |||||||||| Sbjct 130783 CACCACCACGCAGACGAAGGACTAAATGAAGGGTAGATTCCTTCTGAATATTGTAATCGG 130842 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | | ||| ||| | || ||||||||||||||||| || ||||| | ||||| ||| | | Sbjct 130843 ACAATGTACGTCCATCTTCCAATTGTTTTCCGGCGAAGATCAATCTTTGCTGGTCTGGAG 130902 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | ||||| || || ||||| | | |||| || | | |||| | || Sbjct 130903 GAATTCCTTCCTTATCTTGGATTTT-GGCCTTGACATTTTCAATGCTGTCAGCCGCATCA 130961 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || |||| ||||| ||||| ||||| | ||||| |||||||| ||||| Sbjct 130962 ACCTCAAGGGTGATGGTTTTTCCTGTGAGTGTTTTCACAAAGATTTGCAT 131011 >seq123 Length=3260300 Score = 89.7 bits (98), Expect = 3e-13 Identities = 136/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 33560 CTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAA 33619 |||||||||| || ||||| || ||||| | || ||||||||||| || || || | Sbjct 712125 CTTTTTGTATATTATAATCTTGAAGAGTGCGACCATCTTCCAATTGTTTACCAGCGAAGA 712184 Query 33620 TCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAG 33679 |||| | |||||||||| | || | || |||||||| ||||| | || |||| Sbjct 712185 TCAACCTCTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGGATTTT-AGCTTTGACATTT 712243 Query 33680 TC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACA 33738 || | || || | ||| || || | || || || || || ||||| ||||| ||| Sbjct 712244 TCAATAGTATCAGAAGCTTCAACTTCCAAAGTAATGGTCTTGCCAGTTAAAGTTTTGACA 712303 Query 33739 AAGATCTGCAT 33749 ||||||||||| Sbjct 712304 AAGATCTGCAT 712314 >seq336 Length=3726090 Score = 86.0 bits (94), Expect = 4e-12 Identities = 135/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 33560 CTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAA 33619 ||||||| ||||||||||| ||| || || | || || ||||||||||| ||||| | Sbjct 1528380 CTTTTTGGATGTTGTAATCTTGGAGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAGA 1528439 Query 33620 TCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAG 33679 |||| | |||||||| | || | ||||| || || ||||| | | |||| Sbjct 1528440 TCAATCTTTGCTGATCCGGAGGAATTCCTTCCTTATCTTGGATTTT-GGCCTTGACATTT 1528498 Query 33680 TC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACA 33738 || | || || | ||| || || | || || |||||||| || || ||||| ||| Sbjct 1528499 TCAATAGTATCAGAGGCTTCGACCTCCAAGGTAATAGTTTTACCAGTCAAAGTTTTGACA 1528558 Query 33739 AAGATCTGCAT 33749 ||||||||||| Sbjct 1528559 AAGATCTGCAT 1528569 >seq222 Length=7060343 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 33560 CTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAA 33619 |||| || || |||||||| || || || | || ||||||||||| |||||||| | Sbjct 1553859 CTTTCTGGATATTGTAATCTTGAAGGGTACGACCATCTTCCAATTGTTTACCGGCAAAGA 1553918 Query 33620 TCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAG 33679 |||| | ||||||||| | || | |||||||| || ||||| | | |||| Sbjct 1553919 TCAATCTTTGCTGATCTGGAGGGATTCCTTCTTTATCCTGGATTTT-AGCCTTGACATTT 1553977 Query 33680 TC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACA 33738 || | ||||| | || || || | ||||| || ||||| || || ||||| ||| Sbjct 1553978 TCAATAGTGTCAGAGGCCTCAACCTCCAAGGTGATGGTCTTACCAGTCAAAGTTTTAACA 1554037 Query 33739 AAGATCTGCATA 33750 || ||||||||| Sbjct 1554038 AAAATCTGCATA 1554049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328702569829440