Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq89 136 9e-27 seq256 123 6e-23 >seq89 Length=3244750 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || | |||||||| || ||||| |||||||||||| ||| ||| Sbjct 1690043 CAGATCTTTGTCAAGACATTGACAGGAAAGACCATCACCTTGGAAGTGGAAGCTTCCGAC 1689984 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| || ||| ||||||||||| |||||||| ||| || || || Sbjct 1689983 ACTATTGAAAATGTCAAGGCCAAGATTCAAGACAAAGAAGGCATTCCTCCAGATCAGCAG 1689924 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | |||||||| || || || ||| ||||||||||| | || || | || |||||| || Sbjct 1689923 CGTCTTATCTTTGCTGGTAAACAGCTGGAAGATGGACGCACACTGTCTGACTACAACATC 1689864 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||||| ||||||||| | ||| || | || || Sbjct 1689863 CAGAAGGAGTCGACTCTTCACTTGGTTCTGCGTCTGCG 1689826 Score = 118 bits (130), Expect = 3e-21 Identities = 157/214 (73%), Gaps = 3/214 (1%) Strand=Plus/Minus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || ||||| |||||||| || ||| | ||||| ||| ||||||||| | Sbjct 1691200 TTTTGTCAAGACCCTCACTGGAAAAACTATAACTCTTGAAGTCGAAGCATCTGACACAAT 1691141 Query 206238 CGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGAC 206296 ||| || ||||| ||| ||||| || |||||||| || || ||| || | Sbjct 1691140 TGAAAATGTGAAAGCTAAA-ATTCAGGACAAAGAAGGCATCCCTCCAGACCAGCAGCGTT 1691082 Query 206297 TTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGA 206356 | || || || || || || ||||||||||| | || ||| | ||||| ||| |||| | Sbjct 1691081 TAATTTTTGCTGGTAAACAATTGGAAGATGGTCGCACATTGTCAGATTATAACATCCAAA 1691022 Query 206357 AAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||||| ||||||||| | ||| || | ||||| Sbjct 1691021 AAGAGTCAACTCTTCACTTGGTTCTGCGTCTTCG 1690988 Score = 116 bits (128), Expect = 9e-21 Identities = 155/215 (72%), Gaps = 3/215 (1%) Strand=Plus/Minus Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223 |||||| ||||| ||| || ||||| || || ||||| ||||| ||||| || || Sbjct 1692123 AAAATG---CAGATCTTTGTGAAGACGCTGACTGGTAAAACCATCACATTGGAGGTCGAG 1692067 Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283 || ||||| | ||| || ||| |||||||||||| ||||| || || || Sbjct 1692066 GCATCCGACACCATTGAAAATGTTAAGGCAAAGATTCAAGACAAAGAGGGCATCCCCCCA 1692007 Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343 ||| || ||| | ||||| || ||||||||| | ||||||||| | || ||| | ||| Sbjct 1692006 GACCAGCAGAGATTGATCTTTGCAGGAAAGCAGCTCGAAGATGGACGCACCTTGTCTGAT 1691947 Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGT 206378 || ||| | ||||| || || || || |||||||| Sbjct 1691946 TATAACATTCAGAAGGAATCCACACTCCACCTTGT 1691912 Score = 98.7 bits (108), Expect = 2e-15 Identities = 151/214 (71%), Gaps = 1/214 (0%) Strand=Plus/Minus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| |||||| || ||||| ||||| ||||| | || || ||| || |||||| | Sbjct 1691656 TTTTGTCAAAACTCTGACAGGTAAAACCATCACACTTGAGGTCGAAGCCTCCGACACAAT 1691597 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 ||| || ||| || |||||||| |||||||||||| || || || | || Sbjct 1691596 TGAAAACGTGAAGGCCAAAATTCAAGACAAAGAAGGAATTCCCCCAGATCAACAGCGTCT 1691537 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 || ||||||||||| ||| | ||||| || | |||||| | || ||||| | || || Sbjct 1691536 CATTTTCGCCGGAAAACAGCTTGAAGACGGTCGCACTTTGTCAGACTACAATATTCAAAA 1691477 Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||| || || || | || ||| | ||| || Sbjct 1691476 GGAGTCGACACTGCATTTAGTATTGCGTCTTAGA 1691443 Score = 87.8 bits (96), Expect = 4e-12 Identities = 100/133 (75%), Gaps = 1/133 (1%) Strand=Plus/Minus Query 206246 TAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCG 206305 ||| || ||| |||||||| || || |||||| || || || ||| | ||||| | Sbjct 1691815 TAAGGCCAAA-ATTCAAGATAAGGAGGGAATTCCACCAGATCAGCAGAGATTGATCTTTG 1691757 Query 206306 CCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTA 206365 | ||||| || |||||||||||| | ||| || | ||||||||| | |||||||| || | Sbjct 1691756 CTGGAAAACAATTGGAAGATGGACGCACTCTGTCAGATTACAACATTCAGAAAGAATCCA 1691697 Query 206366 CTCTTCACCTTGT 206378 | || || ||||| Sbjct 1691696 CACTGCATCTTGT 1691684 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 || || | || ||| | ||||||||| ||||| ||||||| || ||||||| || || Sbjct 1689826 CGCAGACGCAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCAGACAGTGTG 1689885 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | ||||||||||||||| || || || |||||||| || || ||| Sbjct 1689886 CGTCCATCTTCCAGCTGTTTACCAGCAAAGATAAGACGCTGCTGA 1689930 Score = 86.0 bits (94), Expect = 1e-11 Identities = 138/196 (70%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || || || || || || ||||| ||||| || ||| ||||||| Sbjct 1690977 CAGATTTTTGTCAAGACTCTGACTGGCAAGACTATCACATTGGAGGTTGAAGCTTCTGAC 1690918 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| || ||||| || ||||||||| ||||| ||||| || ||| || Sbjct 1690917 ACTATTGAAAATGTCAAAGCTAA-GATTCAAGATAAAGAGGGAATCCCACCAGACCAACA 1690859 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | || ||||| || || || || | || ||||| | ||| | | || ||||| | Sbjct 1690858 GCGTCTCATCTTTGCTGGCAAACAACTTGAGGATGGTCGCACTCTATCTGACTACAATAT 1690799 Query 206352 CCAGAAAGAGTCTACT 206367 ||||||||||| ||| Sbjct 1690798 TCAGAAAGAGTCAACT 1690783 Score = 84.2 bits (92), Expect = 5e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || ||||| || ||||||||||| || || |||||| | ||| Sbjct 1691421 AAAACATTGACTGGTAAAACCATTACTTTGGAAGTCGAGGCCTCAGACACAATTGAAAAT 1691362 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| ||||| ||||||||||| || || || | | || || Sbjct 1691361 GTCAAGGCCAAGATCCAAGACAAAGAAGGAATCCCACCAGATCAGCAGCGTTTAATTTTT 1691302 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||||||||||||||| | || ||| | || || || | || |||||||| Sbjct 1691301 GCTGGTAAGCAGTTGGAAGATGGTCGCACATTGTCGGACTATAATATTCAAAAAGAGTCC 1691242 Query 206365 ACTCTTCAC 206373 || || ||| Sbjct 1691241 ACCCTCCAC 1691233 >seq256 Length=3517054 Score = 123 bits (136), Expect = 6e-23 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| |||||||||||||| ||||| | || || || |||||| | ||| Sbjct 130996 AAAACACTCACAGGAAAAACCATCACCCTTGAGGTTGATGCGGCTGACAGCATTGAAAAT 130937 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| || || ||||| || ||||||||| || ||| |||||| | |||||| Sbjct 130936 GTCAAGGCCAAAATCCAAGATAAGGAAGGAATTCCTCCAGACCAGCAAAGATTGATCTTC 130877 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 |||||||| || |||||||||||| | || ||| |||||||||| | ||||| || ||| Sbjct 130876 GCCGGAAAACAATTGGAAGATGGACGTACATTGTCCGATTACAATATTCAGAAGGAATCT 130817 Query 206365 ACTCTTCA 206372 || ||||| Sbjct 130816 ACCCTTCA 130809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181815394277797