Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq89 113 4e-20 seq222 86.0 6e-12 >seq89 Length=3244750 Score = 113 bits (124), Expect = 4e-20 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| |||| |||||| || | | ||||| || || ||||||||||| || || Sbjct 1689825 ACGCAGACGCAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCAGACAGTGT 1689884 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || |||||| ||||||||||| | | |||| |||||||| ||||||||||| ||||| Sbjct 1689885 GCGTCCATCTTCCAGCTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGAATGCC 1689944 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 |||||| || ||| || || | | ||| | ||| |||| | |||||||| | Sbjct 1689945 TTCTTTGTCTTGAATCTTGGCCTTGACATTTTCAATAGTGTCGGAAGCTTCCACTTCCAA 1690004 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || || || |||| || || | || |||||||| Sbjct 1690005 GGTGATGGTCTTTCCTGTCAATGTCTTGACAAAGATCTGCAT 1690046 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| || ||||| | | ||||| |||||||| |||||||| || || || Sbjct 1691450 CGCAATACTAAATGCAGTGTCGACTCCTTTTGAATATTGTAGTCTGACAAAGTGCGACCG 1691509 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| |||||||| |||| | || ||||||||||||||||| || || |||||||| Sbjct 1691510 TCTTCAAGCTGTTTTCCGGCGAAAATGAGACGCTGTTGATCTGGGGGAATTCCTTCTTTG 1691569 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || |||||| |||| | ||| | || |||| | || || || | || | Sbjct 1691570 TCTTGAATTTTGGCCTTCACGTTTTCAATTGTGTCGGAGGCTTCGACCTCAAGTGTGATG 1691629 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| ||||||||||| | ||||| ||||| Sbjct 1691630 GTTTTACCTGTCAGAGTTTTGACAAAAATTTGCAT 1691664 Score = 107 bits (118), Expect = 2e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| |||| |||||||| | | ||||||| || |||||||| || || | || Sbjct 1690531 ACGCAGACGCAGCACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAATCTGAGAGTGT 1690590 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| ||| || | ||| ||||| | | | |||||||||||||| |||||||| || || Sbjct 1690591 ACGTCCATCCTCCAACTGCTTACCAGCAAAAATTAGACGCTGTTGGTCTGGAGGGATACC 1690650 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 ||| || || ||||| ||||| | || | ||||| | | || || || | Sbjct 1690651 TTCCTTGTCCTGGATTTTGGCTTTCACATTCTCAATGGTATCAGAAGCTTCAACCTCCAA 1690710 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || |||||||| ||||| |||| ||||||||||| Sbjct 1690711 AGTGATGGTCTTACCAGTAAGAGTCTTTACAAAAATCTGCAT 1690752 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| |||||| || | ||||||||||||| ||||| || || || || || | Sbjct 1690994 CGCAGAACCAAGTGAAGAGTTGACTCTTTTTGGATGTTATAATCTGACAATGTGCGACCA 1691053 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | |||||||| | | | |||| |||||| || |||||||| ||||||||||| Sbjct 1691054 TCTTCCAATTGTTTACCAGCAAAAATTAAACGCTGCTGGTCTGGAGGGATGCCTTCTTTG 1691113 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || |||||| ||||| | ||| | || || | | || ||||| | || | Sbjct 1691114 TCCTGAATTTTAGCTTTCACATTTTCAATTGTGTCAGATGCTTCGACTTCAAGAGTTATA 1691173 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| ||||| || || || | ||||| ||||| Sbjct 1691174 GTTTTTCCAGTGAGGGTCTTGACAAAAATTTGCAT 1691208 Score = 98.7 bits (108), Expect = 9e-16 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 |||| || || || ||||| | |||||||||| ||||| |||||||| | || Sbjct 1690760 CGCAGACGTAATACTAAATGCAAAGTTGACTCTTTCTGAATATTGTAGTCAGATAGAGTG 1690819 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 || ||| || || ||||| || | | |||| ||||||||||| ||||| || || || Sbjct 1690820 CGACCATCCTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGGTCTGGTGGGATTCCC 1690879 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 |||||||| ||| || ||| | | ||| | ||| || | | || || || | Sbjct 1690880 TCTTTATCTTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGCTTCAACCTCCAAT 1690939 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || | || || ||||||||||| || | |||||||||||| Sbjct 1690940 GTGATAGTCTTGCCAGTCAGAGTCTTGACAAAAATCTGCATG 1690981 Score = 93.3 bits (102), Expect = 4e-14 Identities = 156/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| || | ||||| || | | | |||||||||||||| || ||||| || || Sbjct 1691215 ACGCAGACGGAGTACCAAGTGGAGGGTGGACTCTTTTTGAATATTATAGTCCGACAATGT 1691274 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || |||||| | ||| ||||| | | | |||| |||||| |||||||| || || || Sbjct 1691275 GCGACCATCTTCCAACTGCTTACCAGCAAAAATTAAACGCTGCTGATCTGGTGGGATTCC 1691334 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 |||||| || || || || | | ||| | || || | | ||| ||||| | Sbjct 1691335 TTCTTTGTCTTGGATCTTGGCCTTGACATTTTCAATTGTGTCTGAGGCCTCGACTTCCAA 1691394 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACT 132127 || | ||||||||||||| ||||| | || || |||||| || Sbjct 1691395 AGTAATGGTTTTACCAGTCAATGTTTTAACAAAGATTTGCATGCCT 1691440 >seq222 Length=7060343 Score = 86.0 bits (94), Expect = 6e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 131934 CTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATAGA 131993 |||| || || ||||| || | |||||| |||||| | |||||||||| | ||| Sbjct 1553859 CTTTCTGGATATTGTAATCTTGAAGGGTACGACCATCTTCCAATTGTTTACCGGCAAAGA 1553918 Query 131994 TTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTGTT 132053 | | | || ||||||||||| || ||||||||||| ||||| || | | || Sbjct 1553919 TCAATCTTTGCTGATCTGGAGGGATTCCTTCTTTATCCTGGATTTTAGCCTTGACATTTT 1553978 Query 132054 CCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTATGA 132113 | | ||| || | | ||| || || | || | || |||||||||| |||||| | | Sbjct 1553979 CAATAGTGTCAGAGGCCTCAACCTCCAAGGTGATGGTCTTACCAGTCAAAGTTTTAACAA 1554038 Query 132114 AAATCTGCAT 132123 |||||||||| Sbjct 1554039 AAATCTGCAT 1554048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476609073122520