Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq89 105 6e-18 seq256 98.7 9e-16 seq336 93.3 4e-14 >seq89 Length=3244750 Score = 105 bits (116), Expect = 6e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| ||||| | || || ||| | ||||| | || ||||||||| | Sbjct 1691664 ATGCAAATTTTTGTCAAAACTCTGACAGGTAAAACCATCACACTTGAGGTCGAAGCCTCC 1691605 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || || | || || |||||| || ||||| || || || || ||||| Sbjct 1691604 GACACAATTGAAAACGTGAAGGCCAAAATTCAAGACAAAGAAGGAATTCCCCCAGATCAA 1691545 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAAT--GTCAGCGATTACA 25352 || | ||||||| || ||| ||||| || ||||| | | | | | ||||| | |||| Sbjct 1691544 CAGCGTCTCATTTTCGCCGGAAAACAGCTTGAAGACGGTCGCACTTTGTCAG--ACTACA 1691487 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||||| || || || | |||||||| || | | |||||||| Sbjct 1691486 ATATTCAAAAGGAGTCGACACTGCATTTAGTATTGCGTCTTAGAGGAGG 1691438 Score = 93.3 bits (102), Expect = 4e-14 Identities = 123/169 (73%), Gaps = 4/169 (2%) Strand=Plus/Minus Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||||||| ||| | || || |||||| ||||| ||||| || || || |||||| Sbjct 1691832 GATACTATTGAGAATGTTAAGGCCAAAATTCAAGATAAGGAGGGAATTCCACCAGATCAG 1691773 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAAT--GTCAGCGATTACA 25352 || ||| | || | | || |||||| | ||||||| | | | ||||| |||||| Sbjct 1691772 CAGAGATTGATCTTTGCTGGAAAACAATTGGAAGATGGACGCACTCTGTCAG--ATTACA 1691715 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 | ||||| ||||||||||| | ||| | || | |||||||||||||| Sbjct 1691714 ACATTCAGAAAGAATCCACACTGCATCTTGTACTCAGATTGAGAGGAGG 1691666 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 |||||| | ||||| || || | || || || | ||||| | || || ||||| Sbjct 1690981 CATGCAGATTTTTGTCAAGACTCTGACTGGCAAGACTATCACATTGGAGGTTGAAGCTTC 1690922 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || ||||| || | || ||| || ||| ||||||||||| || || || || || Sbjct 1690921 TGACACTATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAGGGAATCCCACCAGACCA 1690862 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 || | ||||| | | ||||||||||| || |||| | | | | | || ||||| Sbjct 1690861 ACAGCGTCTCATCTTTGCTGGCAAACAACTTGAGGATGGTCGCACTCTATCTGACTACAA 1690802 Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||| ||||| || || | |||||||| ||| | || |||| || Sbjct 1690801 TATTCAGAAAGAGTCAACTTTGCATTTAGTATTACGTCTGCGAGGTGG 1690754 >seq256 Length=3517054 Score = 98.7 bits (108), Expect = 9e-16 Identities = 152/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 ||| |||||| | ||||| |||||| | || |||||| | ||||| | || || || || Sbjct 131015 CAAAATGCAAATCTTTGTGAAAACACTCACAGGAAAAACCATCACCCTTGAGGTTGATGC 130956 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 || | || || | || || ||||| ||||| || || || || || || Sbjct 130955 GGCTGACAGCATTGAAAATGTCAAGGCCAAAATCCAAGATAAGGAAGGAATTCCTCCAGA 130896 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGAT 25348 ||||||||| | || | || ||| |||||| | ||||||| | | |||| |||| Sbjct 130895 CCAGCAAAGATTGATCTTCGCCGGAAAACAATTGGAAGATGGACGTACATTGTC--CGAT 130838 Query 25349 TACAATATTCAAAAAGAATCCACCATTCATTTAGT 25383 ||||||||||| || ||||| ||| |||||||||| Sbjct 130837 TACAATATTCAGAAGGAATCTACCCTTCATTTAGT 130803 >seq336 Length=3726090 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 25169 AACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAA 25228 ||||| ||||| | ||||| ||||| || || || ||| | || || | || |||||| Sbjct 1528575 AACAAAATGCAGATCTTTGTCAAAACTTTGACTGGTAAAACTATTACCTTGGAGGTCGAA 1528516 Query 25229 GCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCC 25288 ||| |||||||| || | || || ||||| ||||| || || || || || Sbjct 1528515 GCCTCTGATACTATTGAAAATGTCAAGGCCAAAATCCAAGATAAGGAAGGAATTCCTCCG 1528456 Query 25289 GATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGAT 25348 |||||||||||| | || | | || |||||| | ||||||| | | | | || ||| Sbjct 1528455 GATCAGCAAAGATTGATCTTTGCTGGAAAACAATTAGAAGATGGTCGTACTCTCCAAGAT 1528396 Query 25349 TACAATATTCAAAAAG 25364 ||||| || ||||||| Sbjct 1528395 TACAACATCCAAAAAG 1528380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445092413766240