Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq89 95.1 1e-14 seq336 87.8 2e-12 seq256 87.8 2e-12 seq222 82.4 7e-11 >seq89 Length=3244750 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 ||| || ||||| | || |||||||||||| ||||| || | ||| || || |||| Sbjct 1691452 CAATACTAAATGCAGTGTCGACTCCTTTTGAATATTGTAGTCTGACAAAGTGCGACCGTC 1691511 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 || ||||| || || || || || | ||||| || || | |||| | || |||| Sbjct 1691512 TTCAAGCTGTTTTCCGGCGAAAATGAGACGCTGTTGATCTGGGGGAATTCCTTCTTTGT- 1691570 Query 35644 CATGATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCG 35702 | ||| ||| | ||||| || | | |||||| | ||| ||||| | ||||| | Sbjct 1691571 CTTGAATTTTGGCCTTCACGTTTTCAATTGTGTCGGAGGCTTCGACCTCAAGTGTGATGG 1691630 Query 35703 TTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||| |||| |||||| ||||| || ||||| Sbjct 1691631 TTTTACCTGTCAGAGTTTTGACAAAAATTTGCAT 1691664 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || ||||| || | || ||| ||||| ||||| ||||| | | Sbjct 1690982 CCACCACGAAGACGCAGAACCAAGTGAAGAGTTGACTCTTTTTGGATGTTATAATCTGAC 1691041 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || |||| || ||||| ||||| || || ||||||||||| | ||| Sbjct 1691042 AATGTGCGACCATCTTCCAATTGTTTACCAGCAAAAATTAAACGCTGCTGGTCTGGAGGG 1691101 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688 | || || |||||| ||| ||| || |||| | || | | ||||| | ||| || Sbjct 1691102 ATGCCTTCTTTGTCC-TGAATTTTAGCTTTCACATTTTCAATTGTGTCAGATGCTTCGAC 1691160 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 || | || || ||||| || || | || || ||||| || ||||||| Sbjct 1691161 TTCAAGAGTTATAGTTTTTCCAGTGAGGGTCTTGACAAAAATTTGCATTC 1691210 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 35509 TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGC 35568 |||||| || | | || || || || | ||| ||| ||||| || ||||| || | Sbjct 1689591 TCCACCCCGGAGACGTAATACTAAGTGAAGTGTAGACTCTTTTTGGATATTGTAGTCTGA 1689650 Query 35569 CAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628 | || || | || || || ||||| || ||||| ||||| ||||||||||| | ||| Sbjct 1689651 TAGAGTACGACCATCCTCAAGTTGCTTGCCAGCAAAAATCAAACGCTGCTGGTCTGGAGG 1689710 Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688 | | ||||||||| |||||| || | | | | | || || | ||| || Sbjct 1689711 GATACCTTCCTTGTCCTGGATCTTGGCTTTTACATTCTCAATGGTATCAGAAGCTTCAAC 1689770 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| ||||| || ||||| || | ||| || ||||| |||||||| Sbjct 1689771 CTCCAATGTGATGGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 1689818 >seq336 Length=3726090 Score = 87.8 bits (96), Expect = 2e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 35549 TTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATC 35608 ||||| ||||||||||| | || || | || || | || || || ||||| ||| Sbjct 1528382 TTTTGGATGTTGTAATCTTGGAGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAGATC 1528441 Query 35609 AACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCC 35668 || | ||||| |||| ||||| | ||||| || ||| || ||| | | || | Sbjct 1528442 AATCTTTGCTGATCCGGAGGAATTCCTTCCTTATCTTGGATTTTGGCCTTGACATTTTCA 1528501 Query 35669 ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAAT 35728 | || || | ||| ||||||| || || |||||||| ||||||||||| ||||| Sbjct 1528502 ATAGTATCAGAGGCTTCGACCTCCAAGGTAATAGTTTTACCAGTCAAAGTTTTGACAAAG 1528561 Query 35729 ATCTGCATTCTGT 35741 ||||||||| ||| Sbjct 1528562 ATCTGCATTTTGT 1528574 >seq256 Length=3517054 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | || ||||| | ||| ||||| ||||| |||||||||| | Sbjct 130785 CCACCACGCAGACGAAGGACTAAATGAAGGGTAGATTCCTTCTGAATATTGTAATCGGAC 130844 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || |||| || || || || || ||||| | |||||||| | |||| Sbjct 130845 AATGTACGTCCATCTTCCAATTGTTTTCCGGCGAAGATCAATCTTTGCTGGTCTGGAGGA 130904 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| || ||| || ||| | | || | | |||| || || ||| Sbjct 130905 ATTCCTTCCTTATCTTGGATTTTGGCCTTGACATTTTCAATGCTGTCAGCCGCATCAACC 130964 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | ||||| ||||| || || | ||||||||||| || |||||| || Sbjct 130965 TCAAGGGTGATGGTTTTTCCTGTGAGTGTTTTCACAAAGATTTGCATTTTG 131015 >seq222 Length=7060343 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/197 (70%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 35547 CCTTT-TGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || || |||||||| | ||| || | || |||| || ||||| ||||| Sbjct 1553858 CCTTTCTGGATATTGTAATCTTGAAGGGTACGACCATCTTCCAATTGTTTACCGGCAAAG 1553917 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| | ||||| || | ||| | | || || ||| ||| || ||| | | || Sbjct 1553918 ATCAATCTTTGCTGATCTGGAGGGATTCCTTCTTTATCCTGGATTTTAGCCTTGACATTT 1553977 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| | || ||||||| ||||| || ||||| ||||||||||| ||| Sbjct 1553978 TCAATAGTGTCAGAGGCCTCAACCTCCAAGGTGATGGTCTTACCAGTCAAAGTTTTAACA 1554037 Query 35726 AATATCTGCATTCTGTG 35742 || |||||||| |||| Sbjct 1554038 AAAATCTGCATATTGTG 1554054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450791588333560