Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq34 246 4e-60 seq56 145 1e-29 >seq34 Length=2688268 Score = 246 bits (272), Expect = 4e-60 Identities = 404/579 (70%), Gaps = 9/579 (2%) Strand=Plus/Plus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 ||||||| | | ||||| ||| || || || ||||| ||||||| ||| ||||| | Sbjct 1149186 CCTCATCGCGAGAAATTAGTTCATTGCTGAAAGTAAGTCCTGGCATTAAACCTCGCTTCT 1149245 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 | | ||||||||||||||||||| ||| ||||| || ||||| || |||||||| | Sbjct 1149246 TCAACCAAAATATGGCAGCAAAACTACCACTGAAGAAAATTCCTTCAACAGCTGCAAAAG 1149305 Query 39759 CAACAAGTCTCTCTCCGTAACTTGTATCA---TTATGT---ATCCACTTCTGTGCCCAAT 39812 | | || ||| ||| | || | ||| || ||||| ||||| ||| ||||| | Sbjct 1149306 CTATAA--CTCGCTCAGCAAAT-GTAGCACTCTTATGACTGATCCAGTTCATAGCCCAGT 1149362 Query 39813 CAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAATGTTTTTCAT 39872 ||||||||| | |||||||| | ||||| || ||||| || | || | | | | Sbjct 1149363 TAGCTTTCTTGGTAACACAAGGTAGAGTTTCAATTGCATTGAACAAGTAGTCCCTCTGAG 1149422 Query 39873 CACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCAA 39932 ||| ||| || ||||| || | || |||||||||||| || | ||||| | Sbjct 1149423 ATGGATCAGTAATGTAGGTATCAATAAGAAGTGAATACATTTCTGAGTGCACATTTTCCA 1149482 Query 39933 TCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATC 39992 | || | || || || || || || | || ||||| | ||| || || | |||| Sbjct 1149483 TGGCTACTTGGAAGCCATAGAAGCAGCGAGCCTCAGTGACTTGAACTTCCTGGCTGAATC 1149542 Query 39993 TTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTT 40052 || | | ||||||||| || || |||||| || ||||| ||||| |||||||| Sbjct 1149543 GCTCAACGAGATTTTCATTGACAATGCCATCAGAGGCAGCAAAGAATGCTAATACATGAG 1149602 Query 40053 TAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTTTTGATATAT 40112 |||||||| ||| || | | |||| || ||| || | ||||| ||||||| | Sbjct 1149603 AAATAAAATGTTTCTCGTTGTCATTCAACTTTGCCCAATCGTGCATATCCTTTGATAAGT 1149662 Query 40113 CTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCAC 40172 |||||||||| | |||||||| || ||||| || || |||||||||| ||| |||||| Sbjct 1149663 CTACTTCTTCGACCGTCCAAAATGAAGCCTCAGCTTTCTTGTACATGTGCCAAATATCAG 1149722 Query 40173 GATATTGTATTGGAAAAATAACAAATCTATTTGGATTTT 40211 | |||| || ||||| || || || | | ||||||| Sbjct 1149723 GCCATTGAATGGGAAAGATCACGAAACGAGAAGGATTTT 1149761 >seq56 Length=4197193 Score = 145 bits (160), Expect = 1e-29 Identities = 182/250 (73%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 68644 ATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGA 68703 |||||| |||||| || || |||| ||| | | ||| || || || || | | ||| Sbjct 1121853 ATAATTTCATTCTTCATGTCTTCATCCCAAAGATCTCTTTCAGTCAAGTCTTTCAAAAGA 1121794 Query 68704 TGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTA 68763 || ||||| || ||||| ||||| |||||||| ||||| || | |||||||||||||| Sbjct 1121793 TGAGGATTGACGATTTGGAATTCTCCAGATAAGACTCTTCGTGAATAAATATTACTGGTG 1121734 Query 68764 TATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGT 68823 || || || | |||||| |||||||| || ||||| || || |||||||| ||||| ||| Sbjct 1121733 TAAGGCTCTATAGATTCGTTATTTCCAAGTATTTGTGCTGTCGATGCAGTAGGCATTGGT 1121674 Query 68824 GCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAA 68883 || | | ||| |||||| | |||| | ||||| |||| | | | |||| Sbjct 1121673 GCAAGAAGTAATGAATTTCTCACTCCATATTGAGCAATTTTTGCTTTCAAAGCTGCCCAA 1121614 Query 68884 TCCCAAAGAT 68893 ||||| |||| Sbjct 1121613 TCCCAGAGAT 1121604 Score = 138 bits (152), Expect = 2e-27 Identities = 220/313 (70%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 69661 TTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGA 69720 || |||||||||||||| ||||| ||||| || | ||| || | |||||| ||||| ||| Sbjct 1120525 TTACCTGTATTTTTTTTGAGATCAAGAAATTCAAAAATGTCCGCATGCCAAGGTTCAAGA 1120466 Query 69721 TATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTA 69780 || || || | |||| || | ||||| ||||| || || | || | || |||||| Sbjct 1120465 TACATTGCAAAAGCTCCTGGCCTCTTATTACCTCCTTGGTCAACATAGCGTGCTGTGTTA 1120406 Query 69781 TTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAA 69840 ||||| ||||| | ||| |||| | ||||||||| ||||||||||| | ||| Sbjct 1120405 TTATACACTCTTAACATAGGAACTAAACCATTAGAAACTCCATTTGTTCCGGCAATTCTT 1120346 Query 69841 CTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATT 69900 | || | || | || | | | | ||| || ||||| || |||| | | Sbjct 1120345 GTACCCTTGGCTCTGATTGTGTGGACACTCAAACCAATGCCTCCAGCAGATTTACTTACT 1120286 Query 69901 AGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCA-TGTTAAG 69959 |||||||| | || ||||||||||| ||||| || || ||||| || ||| ||| || Sbjct 1120285 AGAGCACATCTCTTTAATGTGTCATAAATACCTTCAATACTATCTTCAGTCATTGTCAAC 1120226 Query 69960 AAGAAAACAGCTA 69972 ||| || |||||| Sbjct 1120225 AAG-AAGCAGCTA 1120214 Score = 113 bits (124), Expect = 6e-20 Identities = 115/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 70344 tttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTC 70403 ||| || ||||| || ||||||||||| || |||||||| || |||| ||| |||||||| Sbjct 1119695 TTTCTTGGTTTCTTTATGTAAATTTGAGATTGCTATTCTAGCAGCTAAAATTGCATAGTC 1119636 Query 70404 AGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGT 70463 | ||||| |||||| || || || |||| |||||||| |||| | ||| | ||| Sbjct 1119635 TGCATGTTTTGTAGTCATTGTGGCAGCGGTTTCAGCAGCTAAGTTATCAAGTTCCACAGT 1119576 Query 70464 TGTAACTCCGTTATATAGCCCTTGAATAAC 70493 ||||||||| ||| ||||| | ||||| Sbjct 1119575 TGTAACTCCAGAATAAAGCCCATTGATAAC 1119546 Score = 109 bits (120), Expect = 8e-19 Identities = 126/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 68440 CTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATA 68499 ||||| || ||||| ||||| || ||||| | | || | || ||||| | | Sbjct 1122143 CTCCAACCATAGAAGTGCATGGACGTAAGTTTTTCAGTCGTAGGTTTAGCCATATGTACA 1122084 Query 68500 TTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTC 68559 || | |||||| |||||| |||||||||||||||||||| |||||||| | |||| || Sbjct 1122083 TTGAGAGATTGAGATTGATCAATGAAAGCTCCTCTATCTGCAGCCATTTTCAAAATAGTC 1122024 Query 68560 TTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGG 68609 ||||| | |||||||||| ||||||| | | ||||| | ||| || || Sbjct 1122023 TTTTGGGATATTTCCCAAACAGTCTTATATAGTTGTTTCAGATCGTCGGG 1121974 Score = 95.1 bits (104), Expect = 2e-14 Identities = 171/248 (69%), Gaps = 4/248 (2%) Strand=Plus/Minus Query 69256 ACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCA 69315 ||||||||||| | || | ||||| | |||||||||||| || |||| || || Sbjct 1121073 ACAAACATATTAACAGCAATTGATGCCAAATTACAAACTGCCACTTCATCAGGTGATGAG 1121014 Query 69316 TATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTA 69375 || |||| | ||| ||||||| |||||||| | |||| || |||| |||||| ||||| Sbjct 1121013 TACTGTACAACCTCAGTACATAAATTACTACTTCTGATTGTGCCCAAATTTTGTTGATTG 1120954 Query 69376 CTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGAT 69435 || ||||| || || ||||| | || | || || |||||||| | || || Sbjct 1120953 GATTTACGATTACAAGCATCTTTGTATAACATGTATGGTGTTCCAGTTTCTACTTGTGAC 1120894 Query 69436 TCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTC--TTGTAACGCTTCTCTT 69493 | || || | |||| | | | ||||| ||| ||| |||||||| || |||| Sbjct 1120893 ATCAAAACAGCTGTCCATAAATCACGAGCATCAATT--TGTCGTTTGTAACGTTTTTCTT 1120836 Query 69494 TTTCATAT 69501 ||| ||| Sbjct 1120835 CTTCGTAT 1120828 Score = 93.3 bits (102), Expect = 6e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 70048 TTGTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATC 70107 ||||||||||||||| || || | || | ||||| | | ||||| | ||| Sbjct 1120077 TTGTATGTTTCAATAACTTTATCAAGATTTTCTTCATGAACAGCAACAGCGACTCTCATG 1120018 Query 70108 AACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCC 70167 | ||||||||| |||| ||| || ||| ||| |||||||| | || | | ||| Sbjct 1120017 AGCATATGCTGTGGTCTTTCAACAACTTTGCCATTGATTTTCAATAAATAGCTTCTCTCC 1119958 Query 70168 AGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTT 70227 | |||||||| ||||| ||||| ||| ||| ||||| || || ||||| ||||||| Sbjct 1119957 AATGTTTTAAATCCAAAGTAGTTATATCCAAAATCTCTGTCATAGATAATTGCAGAATTC 1119898 Query 70228 AGTTTATCCTT 70238 | |||||| || Sbjct 1119897 AATTTATCTTT 1119887 Score = 91.5 bits (100), Expect = 2e-13 Identities = 126/174 (72%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 69506 TATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGAC 69565 |||| ||| || ||||| || ||||| ||||| ||| || |||||||||| |||| Sbjct 1120757 TATAAAGCTTGTCAAATTCTTCACCCCATACATCTGGCAAGCCTGGACATTCATGAGGAC 1120698 Query 69566 ACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAA 69625 ||||||| ||| ||| ||| |||| || ||| |||| ||| || ||||| | Sbjct 1120697 ACATCAAACTCCATTTTCCATTATCAAAGACTCTTTGCATGAATAAATCTGGGATCCACA 1120638 Query 69626 GAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttA 69678 ||| ||| || || ||||||| ||||| |||||| || |||| | || |||| Sbjct 1120637 AAGC-ATAGAAAAGTTCTCTGGCTCTATGTTCTTCTTTGCCTGCAATTAATTTA 1120585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686905734669480