Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq34 102 1e-16 >seq34 Length=2688268 Score = 102 bits (112), Expect = 1e-16 Identities = 333/504 (66%), Gaps = 14/504 (3%) Strand=Plus/Plus Query 122678 CCTCATCTCGGGAAATAAGTTCATT--TGAGAAGCATAGACCTGGCATGAGACCCCGCTT 122735 ||||||| || ||||| |||||||| ||| ||| | || |||||||| | ||| ||||| Sbjct 1149186 CCTCATCGCGAGAAATTAGTTCATTGCTGA-AAGTA-AGTCCTGGCATTAAACCTCGCTT 1149243 Query 122736 CTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAA 122794 |||||||||| | || || ||| || | || |||||| || || || ||| |||| Sbjct 1149244 CTTCAACCAAAATATGGCAGCAAAACTA-CCACTGAAGAAAATTCCTTCAACAGCTGCAA 1149302 Query 122795 ACGCAAAAAGGCGTTCGGCGAA-GGAGCGAGACTTTGCATCAAACCATTTCATTGCCCAT 122853 | || | || || || || || | ||| | ||| | | ||| ||||| ||||| Sbjct 1149303 AAGCTATAACTCGCTCAGCAAATGTAGC-ACTCTTATGACTGATCCAGTTCATAGCCCAG 1149361 Query 122854 TTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTTTTCA 122913 || || ||||| || ||| |||| ||||| || || | || || | | | | | | Sbjct 1149362 TTAGCTTTCTTGGTAACACAAGGTAGAGTTTCAATTGCATTGAACAAGTAGTCCCTCTGA 1149421 Query 122914 GATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCATTTCA 122973 ||| ||| ||||||| | ||||| | |||||| |||| || || |||| Sbjct 1149422 GATGGATCAGTAATGTAGGTATCAATAAGAAGTGAATACATTTCTGAGTGCACATTTTC- 1149480 Query 122974 TTATGGC--ATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAACCTCATCCGCAA 123031 ||||| ||| | | ||||| |||| || || | | ||||| || | || Sbjct 1149481 -CATGGCTACTTGGAAGCCATAGAAGCAGCGAGCCTCAGTGACTTGAACTTCCT-GGCTG 1149538 Query 123032 AATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGGATG 123090 ||| | | | || ||| ||| ||||| ||||| || ||||||||||||| | | Sbjct 1149539 AATCGCTCAACGAGATTTTCATTGACAATGCCATCAGAGGCAGCAAAGAATGCTAATACA 1149598 Query 123091 TACTTTATGAATTTCTTTTCATTTTCATTCAGGGTCTTCCAGTCGTCAAGATCTTTGGAC 123150 | || || | || || || ||||||| | ||| |||| | ||| || || Sbjct 1149599 TGAGAAATAAAATGTTTCTCGTTGTCATTCAACTTTGCCCAATCGTGCATATCCTTTGAT 1149658 Query 123151 AAATCAACTTCTTCCGCAGTCCAA 123174 || || |||||||| | |||||| Sbjct 1149659 AAGTCTACTTCTTCGACCGTCCAA 1149682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628029197407200