Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq34 82.4 8e-11 >seq34 Length=2688268 Score = 82.4 bits (90), Expect = 8e-11 Identities = 131/185 (71%), Gaps = 5/185 (3%) Strand=Plus/Minus Query 59931 AAAGCAGAATGGGCCATGCAGTGGATGAGTCCTG---GAGCATCATTTGCACAACGTCTC 59987 ||||| | ||||| ||| | ||||| |||| | | || ||||||| | || | Sbjct 1149369 AAAGCTAACTGGGCTATGAACTGGATCAGTCATAAGAGTGCTACATTTGCTGAGCGAGTT 1149310 Query 59988 ATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTG-TGCTATTTTCTG 60046 |||||||||||| || |||||||| |||||| ||| | ||| || ||| || || || Sbjct 1149309 ATAGCTTTTGCAGCTGTTGAAGGAATTTTCTTCAGTGG-TAGTTTTGCTGCCATATTTTG 1149251 Query 60047 GCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGA 60106 | | || ||||| || | ||||| || || | |||| ||| || || ||||| || || Sbjct 1149250 GTTGAAGAAGCGAGGTTTAATGCCAGGACTTACTTTCAGCAATGAACTAATTTCTCGCGA 1149191 Query 60107 CGAGG 60111 |||| Sbjct 1149190 TGAGG 1149186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548522352208080