Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq89 205 1e-47 seq256 163 3e-35 seq123 143 3e-29 seq336 120 3e-22 seq222 120 3e-22 seq1 87.8 2e-12 >seq89 Length=3244750 Score = 205 bits (226), Expect = 1e-47 Identities = 182/228 (80%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||||||||| || || || || ||||| |||||||| || || || Sbjct 1691209 AATGCAAATTTTTGTCAAGACCCTCACTGGAAAAACTATAACTCTTGAAGTCGAAGCATC 1691150 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | |||| |||| |||| ||||||||||||||||| || || || ||||||||||| Sbjct 1691149 TGACACAATTGAAAATGTGAAAGCTAAAATTCAGGACAAAGAAGGCATCCCTCCAGACCA 1691090 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||||| |||||||||||||||| ||| | || |||| ||| || | |||| ||||| Sbjct 1691089 GCAGCGTTTAATTTTTGCTGGTAAACAATTGGAAGATGGTCGCACATTGTCAGATTATAA 1691030 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||| || || |||||||| | || |||||||||| ||||| Sbjct 1691029 CATCCAAAAAGAGTCAACTCTTCACTTGGTTCTGCGTCTTCGTGGTGG 1690982 Score = 203 bits (224), Expect = 4e-47 Identities = 183/230 (80%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| ||||| || ||||| || || | |||||||| | | Sbjct 1689818 ATGCAGATTTTTGTTAAGACTCTTACTGGTAAGACCATCACATTGGAGGTTGAAGCTTCT 1689759 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| | || || || || ||||||||||| || || |||||||||||| Sbjct 1689758 GATACCATTGAGAATGTAAAAGCCAAGATCCAGGACAAGGAAGGTATCCCTCCAGACCAG 1689699 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | ||||||||||| |||||||| ||||||| |||||| ||| ||||||| ||| Sbjct 1689698 CAGCGTTTGATTTTTGCTGGCAAGCAACTTGAGGATGGTCGTACTCTATCAGACTACAAT 1689639 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 ||||||| || || || ||||| |||| || ||||| || |||||||| Sbjct 1689638 ATCCAAAAAGAGTCTACACTTCACTTAGTATTACGTCTCCGGGGTGGACA 1689589 Score = 188 bits (208), Expect = 8e-43 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| ||||| || ||||| || ||| | |||||||| | | Sbjct 1690752 ATGCAGATTTTTGTAAAGACTCTTACTGGTAAGACCATCACTTTGGAGGTTGAAGCTTCT 1690693 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| |||| || ||||| ||||||||||| || || ||||||||||| Sbjct 1690692 GATACCATTGAGAATGTGAAAGCCAAAATCCAGGACAAGGAAGGTATCCCTCCAGACCAA 1690633 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||||||||||||||||||||| | ||||||| ||||| || |||| ||||| Sbjct 1690632 CAGCGTCTAATTTTTGCTGGTAAGCAGTTGGAGGATGGACGTACACTCTCAGATTATAAC 1690573 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || || ||| | || ||||||| || ||||| Sbjct 1690572 ATTCAGAAGGAGTCAACCCTCCATTTGGTGCTGCGTCTGCGTGGTGG 1690526 Score = 176 bits (194), Expect = 5e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||||||||| || || ||||||||||| || | |||||||| | | Sbjct 1690980 ATGCAGATTTTTGTCAAGACTCTGACTGGCAAGACTATCACATTGGAGGTTGAAGCTTCT 1690921 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | || ||||| ||||| || || |||||||| || |||||||| Sbjct 1690920 GACACTATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAGGGAATCCCACCAGACCAA 1690861 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || |||||||| || ||||| ||||||| ||| || ||| | ||||| ||| Sbjct 1690860 CAGCGTCTCATCTTTGCTGGCAAACAACTTGAGGATGGTCGCACTCTATCTGACTACAAT 1690801 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || || || || ||| | ||| |||| || ||||| || ||||| Sbjct 1690800 ATTCAGAAAGAGTCAACTTTGCATTTAGTATTACGTCTGCGAGGTGG 1690754 Score = 170 bits (188), Expect = 2e-37 Identities = 163/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||||||||| || || |||||||| ||||| |||||||||||||| Sbjct 1691892 ATGCAAATCTTTGTCAAGACTCTGACTGGCAAGACCATTACCCTTGAGGTTGAGTCTTCA 1691833 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | ||||| |||||||| || |||||||||||||| ||||| ||| Sbjct 1691832 GATACTATTGAGAATGTTAAGGCCAAAATTCAAGATAAGGAGGGAATTCCACCAGATCAG 1691773 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || |||||||| || ||| | || |||| || || || |||| || || Sbjct 1691772 CAGAGATTGATCTTTGCTGGAAAACAATTGGAAGATGGACGCACTCTGTCAGATTACAAC 1691713 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614 | || || |||||||| || ||||| || Sbjct 1691712 ATTCAGAAAGAATCCACACTGCATCTTGT 1691684 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| | || || ||||| || || | || || || | Sbjct 1690046 ATGCAGATCTTTGTCAAGACATTGACAGGAAAGACCATCACCTTGGAAGTGGAAGCTTCC 1689987 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | ||||| || ||||| ||||| || || ||||||||||| ||| Sbjct 1689986 GACACTATTGAAAATGTCAAGGCCAAGATTCAAGACAAAGAAGGCATTCCTCCAGATCAG 1689927 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || ||||||||||| || || || |||| || || || | ||||| || Sbjct 1689926 CAGCGTCTTATCTTTGCTGGTAAACAGCTGGAAGATGGACGCACACTGTCTGACTACAAC 1689867 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || |||||||| | || ||||||| || ||||| Sbjct 1689866 ATCCAGAAGGAGTCGACTCTTCACTTGGTTCTGCGTCTGCGTGGTGG 1689820 Score = 145 bits (160), Expect = 9e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| || || | || || || || |||||| | || || ||| | Sbjct 1691436 ATGCAAATCTTTGTTAAAACATTGACTGGTAAAACCATTACTTTGGAAGTCGAGGCCTCA 1691377 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | ||||| || || || ||||| || ||||| || ||||| ||| Sbjct 1691376 GACACAATTGAAAATGTCAAGGCCAAGATCCAAGACAAAGAAGGAATCCCACCAGATCAG 1691317 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| ||||||||||||||||||| | || |||| ||| || | | ||||||||| Sbjct 1691316 CAGCGTTTAATTTTTGCTGGTAAGCAGTTGGAAGATGGTCGCACATTGTCGGACTATAAT 1691257 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | ||||| || ||||| || || | || | ||||| || |||||| Sbjct 1691256 ATTCAAAAAGAGTCCACCCTCCACTTGGTACTCCGTCTGCGTGGTGGA 1691209 Score = 140 bits (154), Expect = 4e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| |||||||| |||||||| || || || || || || | ||||| ||| || Sbjct 1692121 AATGCAGATCTTTGTGAAGACGCTGACTGGTAAAACCATCACATTGGAGGTCGAGGCATC 1692062 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||||| |||| | ||||| || ||||| ||||| ||||| || || |||||||| Sbjct 1692061 CGACACCATTGAAAATGTTAAGGCAAAGATTCAAGACAAAGAGGGCATCCCCCCAGACCA 1692002 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||| | | || ||||| || ||||| ||||| |||| || ||| | | || ||||| Sbjct 1692001 GCAGAGATTGATCTTTGCAGGAAAGCAGCTCGAAGATGGACGCACCTTGTCTGATTATAA 1691942 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGT 27614 | || ||||||||||| || || || || Sbjct 1691941 CATTCAGAAGGAATCCACACTCCACCTTGT 1691912 >seq256 Length=3517054 Score = 163 bits (180), Expect = 3e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||||||||| || || || || || || || || || ||||||||||| | | Sbjct 131012 AATGCAAATCTTTGTGAAAACACTCACAGGAAAAACCATCACCCTTGAGGTTGATGCGGC 130953 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| ||||||| |||| | ||||| ||||| || || ||||| ||||||||||||||||| Sbjct 130952 TGACAGCATTGAAAATGTCAAGGCCAAAATCCAAGATAAGGAAGGAATTCCTCCAGACCA 130893 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| | | || || || || || ||| | || |||| ||||| | | || || || Sbjct 130892 GCAAAGATTGATCTTCGCCGGAAAACAATTGGAAGATGGACGTACATTGTCCGATTACAA 130833 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | | || |||||||| || |||||| ||||| | ||||| || ||||| Sbjct 130832 TATTCAGAAGGAATCTACCCTTCATTTAGTCCTTCGTCTGCGTGGTGG 130785 >seq123 Length=3260300 Score = 143 bits (158), Expect = 3e-29 Identities = 145/189 (77%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||||||||| || | || |||||||| |||||| | || ||||| | Sbjct 712315 AATGCAGATCTTTGTCAAAACTTTAACTGGCAAGACCATTACTTTGGAAGTTGAAGCTTC 712256 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| |||| |||| | || |||||||| || ||||| ||||||||||||||||| || Sbjct 712255 TGATACTATTGAAAATGTCAAAGCTAAAATCCAAGACAAAGAGGGAATTCCTCCAGATCA 712196 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||| | | || || |||||||| ||| | || |||| ||| || || ||| ||||| Sbjct 712195 GCAGAGGTTGATCTTCGCTGGTAAACAATTGGAAGATGGTCGCACTCTTCAAGATTATAA 712136 Query 27585 TGTCCAAAA 27593 | | ||||| Sbjct 712135 TATACAAAA 712127 >seq336 Length=3726090 Score = 120 bits (132), Expect = 3e-22 Identities = 140/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||||||||| || | || || || |||||||| | ||||| || | Sbjct 1528570 AATGCAGATCTTTGTCAAAACTTTGACTGGTAAAACTATTACCTTGGAGGTCGAAGCCTC 1528511 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| |||| |||| | ||||| ||||| || || ||||| ||||||||||| || || Sbjct 1528510 TGATACTATTGAAAATGTCAAGGCCAAAATCCAAGATAAGGAAGGAATTCCTCCGGATCA 1528451 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| | | || |||||||| || ||| | || |||| |||||| || ||| || || Sbjct 1528450 GCAAAGATTGATCTTTGCTGGAAAACAATTAGAAGATGGTCGTACTCTCCAAGATTACAA 1528391 Query 27585 TGTCCAAAA 27593 ||||||| Sbjct 1528390 CATCCAAAA 1528382 >seq222 Length=7060343 Score = 120 bits (132), Expect = 3e-22 Identities = 142/191 (74%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| || || | || || ||||| || || | ||||||||| | | Sbjct 1554048 ATGCAGATTTTTGTTAAAACTTTGACTGGTAAGACCATCACCTTGGAGGTTGAGGCCTCT 1553989 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | ||||||||||| ||||| || || ||||| |||||||| ||| Sbjct 1553988 GACACTATTGAAAATGTCAAGGCTAAAATCCAGGATAAAGAAGGAATCCCTCCAGATCAG 1553929 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || ||||| ||||| ||| | || |||| ||||||||| ||| || ||| Sbjct 1553928 CAAAGATTGATCTTTGCCGGTAAACAATTGGAAGATGGTCGTACCCTTCAAGATTACAAT 1553869 Query 27586 GTCCA-AAAGG 27595 |||| ||||| Sbjct 1553868 ATCCAGAAAGG 1553858 >seq1 Length=8792355 Score = 87.8 bits (96), Expect = 2e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567 |||||||||||||| ||||| | |||| |||||||| || |||||||| |||| || Sbjct 1064577 GGAATTCCTCCAGATCAGCAAAGATTAATCTTTGCTGGAAAACAACTCGAAGATGGACGC 1064636 Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTC 27615 || || |||||||||| | || || ||||| || ||||| || ||| Sbjct 1064637 ACACTTTCAGACTATAACATTCAGAAAGAATCAACCCTTCACCTTGTC 1064684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570307854989840