Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq211 145 6e-30 >seq211 Length=1509898 Score = 145 bits (160), Expect = 6e-30 Identities = 178/243 (73%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 30223 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30282 ||||||| ||||| || || || |||||||||||||| ||||| ||||| |||| ||| Sbjct 51119 CATGTCCACGTACTTGGCCCCAAAGTGCCTCCACTGGAAGCCGTAAACCGGGCCCAAGTC 51060 Query 30283 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30342 || | || | | | |||||| | || | ||| || | || |||||||||| Sbjct 51059 GCCGACCTCGCGATCCCGGAAGCCGAGCGAATCGAGAAACTCGCGAGACGCGTTGGCGTC 51000 Query 30343 CCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCA 30402 ||| || || | || || | |||||||| |||| ||| || || || | || |||||| Sbjct 50999 CCAAATTTTAATACCTTTGGCGGAGAGCTCGTTGGCGTTGGTCGAGCCACGGATGAACCA 50940 Query 30403 CAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAACTG 30462 ||||||||||| ||||||| |||||| || ||||||||||| || || ||||| || Sbjct 50939 GAGCAGCTCCTCGGCGACGGCGCGCCAAAATACTCTCTTGGTCGTCAGAAGCGGAAATTG 50880 Query 30463 TCC 30465 || Sbjct 50879 GCC 50877 Score = 140 bits (154), Expect = 3e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 29951 ACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGC 30010 ||||| || |||||| | ||||| || |||||| ||| ||||| ||||| ||||| || Sbjct 51455 ACGTGCGCTATCATGCAGGTGAGCAGCGAGTAGGAGGCAATGTTGAAGGGCACCCCCAGA 51396 Query 30011 CCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAAC 30070 |||||||| || | ||||||||| | ||||| |||||||| |||| || ||||||||| Sbjct 51395 CCCATGTCGCCGGCCCTCTGGTACAAGTGACAGGAGAGCTCGCCGTTGCAGACGTAAAAC 51336 Query 30071 TGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCG 30130 || || | |||||| || || || ||||| | ||| || ||||||||| Sbjct 51335 TGGGCCAGCGAGTGGCAGGGCGGCAGGGCCATCTTCGGGATGTCGACCGGATTCCAGGCG 51276 Query 30131 CACACGATGATGCGCCTGTCTTCTGGGTTGTT 30162 | || ||||||||| ||||| || || || || Sbjct 51275 CTCATGATGATGCGTCTGTCGTCGGGATTATT 51244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406308632168844