Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq89 136 2e-27 seq222 86.0 4e-12 seq256 84.2 1e-11 >seq89 Length=3244750 Score = 136 bits (150), Expect = 2e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| |||||||||||||| || ||||| || || |||||||||||| || || ||||| Sbjct 1691437 GCCTCCTCTAAGACGCAATACTAAATGCAGTGTCGACTCCTTTTGAATATTGTAGTCTGA 1691496 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 | || || |||||||||| ||||| ||||| || || | ||||||||| || || || Sbjct 1691497 CAAAGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAAATGAGACGCTGTTGATCTGGGGG 1691556 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCCA 34657 | ||| || |||||| ||| ||| | || ||| | ||||||||| | || | Sbjct 1691557 AATTCCTTCTTTGTCT-TGAATTTTGGCCTTCACGTTTTCAATTGTGTCGGAGGCTTCGA 1691615 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | || || |||||||| || | ||||| |||||||| ||||| Sbjct 1691616 CCTCAAGTGTGATGGTTTTACCTGTCAGAGTTTTGACAAAAATTTGCAT 1691664 Score = 131 bits (144), Expect = 1e-25 Identities = 170/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | |||||||| ||||| || ||||| ||| ||||| |||||||||||||| Sbjct 1690981 GCCACCACGAAGACGCAGAACCAAGTGAAGAGTTGACTCTTTTTGGATGTTATAATCTGA 1691040 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 | ||| || | ||||| | ||||||||| ||||| ||||||||||| ||||| || || Sbjct 1691041 CAATGTGCGACCATCTTCCAATTGTTTACCAGCAAAAATTAAACGCTGCTGGTCTGGAGG 1691100 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTC-TTCGCTCTCC 34656 | || || ||||| ||| ||| | ||| || | ||||||||| ||| || Sbjct 1691101 GATGCCTTCTTTGTC-CTGAATTTTAGCTTTCACATTTTCAATTGTGTCAGATGCT-TCG 1691158 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| | ||||| ||||| || || | || || |||||||| ||||| Sbjct 1691159 ACTTCAAGAGTTATAGTTTTTCCAGTGAGGGTCTTGACAAAAATTTGCAT 1691208 Score = 129 bits (142), Expect = 4e-25 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| ||||| ||| ||| |||||||| ||||| || || | ||| || Sbjct 1691219 AGACGGAGTACCAAGTGGAGGGTGGACTCTTTTTGAATATTATAGTCCGACAATGTGCGA 1691278 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| | || ||||| ||||| ||||||||||| || || || || | ||| || Sbjct 1691279 CCATCTTCCAACTGCTTACCAGCAAAAATTAAACGCTGCTGATCTGGTGGGATTCCTTCT 1691338 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTT 34668 |||||| |||||| || | | |||||||||| | ||| ||||||| || Sbjct 1691339 TTGTCTTGGATCTTGGCCTTGACATTTTCAATTGTGTCTGAGGCCTCGACTTCCAAAGTA 1691398 Query 34669 ATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || |||||||| || || ||||| ||||| || |||||| Sbjct 1691399 ATGGTTTTACCAGTCAATGTTTTAACAAAGATTTGCATG 1691437 Score = 125 bits (138), Expect = 4e-24 Identities = 163/220 (74%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| |||||||||||| || |||||| ||||||||||||||||| ||||| || Sbjct 1690535 AGACGCAGCACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAATCTGAGAGTGTACGT 1690594 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || | || ||||| ||||| |||| |||||||||||| || || | || ||| Sbjct 1690595 CCATCCTCCAACTGCTTACCAGCAAAAATTAGACGCTGTTGGTCTGGAGGGATACCTTCC 1690654 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCACTTCCACGG 34666 ||||| ||| ||| | ||| || | ||| || || ||| || || |||| | Sbjct 1690655 TTGTCCTGGAT-TTTGGCTTTCACATTCTCAATGGTATCAGAAGCT-TCAACCTCCAAAG 1690712 Query 34667 TTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || || ||||| || | || || |||||||||||||| Sbjct 1690713 TGATGGTCTTACCAGTAAGAGTCTTTACAAAAATCTGCAT 1690752 Score = 102 bits (112), Expect = 5e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| ||| ||||| |||||||||||||| || | || || | ||||| || || Sbjct 1691918 TGGAGTGTGGATTCCTTCTGAATGTTATAATCAGACAAGGTGCGTCCATCTTCGAGCTGC 1691977 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || || ||||| || || | ||| ||||| || || | ||||| |||||| ||| || Sbjct 1691978 TTTCCTGCAAAGATCAATCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT-TGAATCTT 1692036 Query 34624 TGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 || ||||| | ||| ||||| ||| || |||| || || |||||||| || Sbjct 1692037 TGCCTTAACATTTTCAATGGTGTCGGATGCCTCGACCTCCAATGTGATGGTTTTACCAGT 1692096 Query 34683 TAACGTTTTCACAAAAATCTGCATGTTGAT 34712 | ||| |||||||| |||||||| || || Sbjct 1692097 CAGCGTCTTCACAAAGATCTGCATTTTTAT 1692126 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || |||| ||||| || || ||||| | ||| ||| || ||||| || || || || Sbjct 1690754 CCACCTCGCAGACGTAATACTAAATGCAAAGTTGACTCTTTCTGAATATTGTAGTCAGAT 1690813 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | || ||||||||||| || ||||| || | |||||||||||| || || Sbjct 1690814 AGAGTGCGACCATCCTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGGTCTGGTGGG 1690873 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTC-TTCGCTCTCCAC 34658 | |||||| || ||| ||||| ||| | | ||| ||||| ||| || || Sbjct 1690874 ATTCCCTCTTTATCTTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGCT-TCAAC 1690932 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||| || || || || || || | || || ||||||||||||||| Sbjct 1690933 CTCCAATGTGATAGTCTTGCCAGTCAGAGTCTTGACAAAAATCTGCATG 1690981 Score = 91.5 bits (100), Expect = 9e-14 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| || || || || || || ||| ||||| || || || ||||| || || || Sbjct 1689601 AGACGTAATACTAAGTGAAGTGTAGACTCTTTTTGGATATTGTAGTCTGATAGAGTACGA 1689660 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || |||||||| || || ||||| || |||||||| ||||| || || | || ||| Sbjct 1689661 CCATCCTCAAGTTGCTTGCCAGCAAAAATCAAACGCTGCTGGTCTGGAGGGATACCTTCC 1689720 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTC-GCTCTCCACTTCCACGGT 34667 ||||| |||||| ||||| ||| || || ||| || || |||| || Sbjct 1689721 TTGTCCTGGATCTTGGCTTTTACATTCTCAATGGTATCAGAAGCT-TCAACCTCCAATGT 1689779 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || ||||| || | || || |||||||||||||| Sbjct 1689780 GATGGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 1689818 >seq222 Length=7060343 Score = 86.0 bits (94), Expect = 4e-12 Identities = 139/196 (71%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 34517 CCTTT-TGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 ||||| || || || |||||| ||| || || | ||||| | ||||||||||||||| Sbjct 1553858 CCTTTCTGGATATTGTAATCTTGAAGGGTACGACCATCTTCCAATTGTTTACCGGCAAAG 1553917 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 || || | || || || || || | ||| || || || ||| ||| | || || | Sbjct 1553918 ATCAATCTTTGCTGATCTGGAGGGATTCCTTCTTTATCCTGGAT-TTTAGCCTTGACATT 1553976 Query 34636 AA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 ||| ||||| | ||| || |||| ||| || || ||||| || || ||||| || Sbjct 1553977 TTCAATAGTGTCAGAGGCCTCAACCTCCAAGGTGATGGTCTTACCAGTCAAAGTTTTAAC 1554036 Query 34695 AAAAATCTGCATGTTG 34710 |||||||||||| ||| Sbjct 1554037 AAAAATCTGCATATTG 1554052 >seq256 Length=3517054 Score = 84.2 bits (92), Expect = 1e-11 Identities = 155/225 (69%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | || ||||| || || ||||| ||||| || ||||| || | ||| || Sbjct 130794 AGACGAAGGACTAAATGAAGGGTAGATTCCTTCTGAATATTGTAATCGGACAATGTACGT 130853 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| | |||||| ||||| || || || | || ||||| || || | ||| ||| Sbjct 130854 CCATCTTCCAATTGTTTTCCGGCGAAGATCAATCTTTGCTGGTCTGGAGGAATTCCTTCC 130913 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTG-TGTCTTCGCTCTCCACTTCCACGGT 34667 || ||| ||| ||| | || || | | || |||| | || || || | ||| Sbjct 130914 TTATCTTGGAT-TTTGGCCTTGACATTTTCAATGCTGTCAGCCGCATCAACCTCAAGGGT 130972 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGAT 34712 || ||||| || || | ||||||||||| || ||||| ||||| Sbjct 130973 GATGGTTTTTCCTGTGAGTGTTTTCACAAAGATTTGCATTTTGAT 131017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314728230631181