Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq211 154 1e-32 >seq211 Length=1509898 Score = 154 bits (170), Expect = 1e-32 Identities = 212/296 (72%), Gaps = 3/296 (1%) Strand=Plus/Plus Query 34154 GACCGGACCGGGACGGGGACCCTCTCCGTGTTCGGCACACAGGCCCGATACAACCTTCGG 34213 ||||| ||||| || |||| || || ||||| || ||| || | || ||| | Sbjct 50814 GACCGCACCGGCGTCGGCACCCATTCAGTATTCGGTACTCAGATGCGCTTCAGCCTGAGA 50873 Query 34214 GGCG---AATTTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAG 34270 | || |||||||||| |||||||| || | || | ||| | ||| | ||||||| Sbjct 50874 GACGGCCAATTTCCGCTTCTGACGACCAAGAGAGTATTTTGGCGCGCCGTCGCCGAGGAG 50933 Query 34271 CTGCTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAG 34330 ||||| |||||| | | || | || ||| |||| |||||||| || || | || Sbjct 50934 CTGCTCTGGTTCATCCGTGGCTCGACCAACGCCAACGAGCTCTCCGCCAAAGGTATTAAA 50993 Query 34331 ATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAG 34390 || |||||||| ||| |||||| || ||||| || || || |||| ||| ||| Sbjct 50994 ATTTGGGACGCCAACGCGTCTCGCGAGTTTCTCGATTCGCTCGGCTTCCGGGATCGCGAG 51053 Query 34391 GAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446 | ||||||||||||||||| ||||| ||||||||||| ||||||||||| |||| Sbjct 51054 GTCGGCGACTTGGGCCCGGTTTACGGCTTCCAGTGGAGGCACTTTGGGGCCAAGTA 51109 Score = 154 bits (170), Expect = 1e-32 Identities = 212/296 (72%), Gaps = 3/296 (1%) Strand=Plus/Minus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 |||| ||||||||||| ||||||||||| ||||| ||||||||||||||||| |||| Sbjct 51109 TACTTGGCCCCAAAGTGCCTCCACTGGAAGCCGTAAACCGGGCCCAAGTCGCCGACCTCG 51050 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 ||| |||| || || || ||||| || |||||| ||| |||||||| || || Sbjct 51049 CGATCCCGGAAGCCGAGCGAATCGAGAAACTCGCGAGACGCGTTGGCGTCCCAAATTTTA 50990 Query 7019 ACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCC 7078 | || || |||||||| |||| ||| || | || | | |||||| ||||||||| Sbjct 50989 ATACCTTTGGCGGAGAGCTCGTTGGCGTTGGTCGAGCCACGGATGAACCAGAGCAGCTCC 50930 Query 7079 TCGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGGAAATT---CGCCCCGA 7135 ||| | ||| | ||| | || | || |||||||| |||||||||| || | | Sbjct 50929 TCGGCGACGGCGCGCCAAAATACTCTCTTGGTCGTCAGAAGCGGAAATTGGCCGTCTCTC 50870 Query 7136 AGGTTGTATCGGGCCTGTGTGCCGAACACGGAGAGGGTCCCCGTCCCGGTCCGGTC 7191 ||| || | || ||| || ||||| || || |||| || ||||| ||||| Sbjct 50869 AGGCTGAAGCGCATCTGAGTACCGAATACTGAATGGGTGCCGACGCCGGTGCGGTC 50814 Score = 113 bits (124), Expect = 4e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 34497 ACGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGA 34556 |||||||||||| |||| || || || |||||| | ||| | ||| |||| |||| Sbjct 51224 ACGTGATCGACAAAGTGAAAAATAATCCCGACGACAGACGCATCATCATGAGCGCCTGGA 51283 Query 34557 ACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACG 34616 | ||| || |||| |||||| || || || |||||| | || ||| || |||| Sbjct 51284 ATCCGGTCGACATCCCGAAGATGGCCCTGCCGCCCTGCCACTCGCTGGCCCAGTTTTACG 51343 Query 34617 TCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGG 34676 || || || ||||| ||||| || | || || | | || |||||||| | |||| Sbjct 51344 TCTGCAACGGCGAGCTCTCCTGTCACTTGTACCAGAGGGCCGGCGACATGGGTCTGGGGG 51403 Query 34677 TGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGT 34728 |||| ||||||||||| ||| | |||||||| | |||||| || || || Sbjct 51404 TGCCCTTCAACATTGCCTCCTACTCGCTGCTCACCTGCATGATAGCGCACGT 51455 Score = 113 bits (124), Expect = 4e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 || || || |||||| | |||||||| | ||| ||||||||||| |||||||| | Sbjct 51455 ACGTGCGCTATCATGCAGGTGAGCAGCGAGTAGGAGGCAATGTTGAAGGGCACCCCCAGA 51396 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAAT 6736 |||||||| || | | || || | || ||||| ||||| || || |||||| || Sbjct 51395 CCCATGTCGCCGGCCCTCTGGTACAAGTGACAGGAGAGCTCGCCGTTGCAGACGTAAAAC 51336 Query 6737 TGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCG 6796 ||| || | |||||| || || || |||||| |||| || ||| ||||| ||| Sbjct 51335 TGGGCCAGCGAGTGGCAGGGCGGCAGGGCCATCTTCGGGATGTCGACCGGATTCCAGGCG 51276 Query 6797 CACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGT 6848 | ||| | ||| | |||||| || || || |||| |||||||||||| Sbjct 51275 CTCATGATGATGCGTCTGTCGTCGGGATTATTTTTCACTTTGTCGATCACGT 51224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448260399629040