Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq89 168 2e-36 seq256 131 4e-25 seq336 109 1e-18 seq112 87.8 4e-12 seq1 87.8 4e-12 >seq89 Length=3244750 Score = 168 bits (186), Expect = 2e-36 Identities = 159/203 (78%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || || || ||||| || || ||||||||||| | || || | |||||| |||| |||| Sbjct 1690550 TGGAGGGTTGACTCCTTCTGAATGTTATAATCTGAGAGTGTACGTCCATCCTCCAACTGC 1690609 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || || || || || || |||||||| ||||| | ||||||||||||||||| || Sbjct 1690610 TTACCAGCAAAAATTAGACGCTGTTGGTCTGGAGGGATACCTTCCTTGTCCTGGATTTTG 1690669 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 |||||| || || ||||| ||||| ||||||||| | |||||| ||||| || || Sbjct 1690670 GCTTTCACATTCTCAATGGTATCAGAAGCTTCAACCTCCAAAGTGATGGTCTTACCAGTA 1690729 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 |||||||||||||| | |||||| Sbjct 1690730 AGAGTCTTTACAAAAATCTGCAT 1690752 Score = 154 bits (170), Expect = 3e-32 Identities = 168/223 (75%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | ||||||||| ||||||||||||||||||||||| | | || Sbjct 1690987 ACGAAGACGCAGAACCAAGTGAAGAGTTGACTCTTTTTGGATGTTATAATCTGACAATGT 1691046 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||||| || || || || || || | || || ||||| ||||| | || Sbjct 1691047 GCGACCATCTTCCAATTGTTTACCAGCAAAAATTAAACGCTGCTGGTCTGGAGGGATGCC 1691106 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||| |||||||| || || |||||| ||||| || |||||||| ||| || || || Sbjct 1691107 TTCTTTGTCCTGAATTTTAGCTTTCACATTTTCAATTGTGTCAGATGCTTCGACTTCAAG 1691166 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||| || || ||||| ||||| ||||| ||||| | |||||| Sbjct 1691167 AGTTATAGTTTTTCCAGTGAGGGTCTTGACAAAAATTTGCATT 1691209 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 |||||| || |||||||||||||| || || || | || || | ||||| || || || Sbjct 1689615 GTGAAGTGTAGACTCTTTTTGGATATTGTAGTCTGATAGAGTACGACCATCCTCAAGTTG 1689674 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 |||||| || || || | || || ||||| ||||| | |||||||||||||||||||| Sbjct 1689675 CTTGCCAGCAAAAATCAAACGCTGCTGGTCTGGAGGGATACCTTCCTTGTCCTGGATCTT 1689734 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 ||| || || || ||||| ||||| ||||||||| | ||||| ||||| || || Sbjct 1689735 GGCTTTTACATTCTCAATGGTATCAGAAGCTTCAACCTCCAATGTGATGGTCTTACCAGT 1689794 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 |||||||| ||||| | |||||| Sbjct 1689795 AAGAGTCTTAACAAAAATCTGCAT 1689818 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||||||||| ||||| || |||||||| || || | || || | ||||||| Sbjct 1689835 AGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCAGACAGTGTGCGTCCATCT 1689894 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| || || || |||||||| || || || || ||||||| ||||| ||||| Sbjct 1689895 TCCAGCTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGAATGCCTTCTTTGTCT 1689954 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || ||||| || ||||| || ||| || || | ||||| ||| Sbjct 1689955 TGAATCTTGGCCTTGACATTTTCAATAGTGTCGGAAGCTTCCACTTCCAAGGTGATGGTC 1690014 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || | ||||| ||||| | |||||| Sbjct 1690015 TTTCCTGTCAATGTCTTGACAAAGATCTGCAT 1690046 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || |||||||| || ||||| || || || ||||||||||| | | ||| | ||| Sbjct 1691905 TCTGAGTACAAGGTGGAGTGTGGATTCCTTCTGAATGTTATAATCAGACAAGGTGCGTCC 1691964 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| |||||||| ||||| ||||| | | || ||||| || || | || || || Sbjct 1691965 ATCTTCGAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGGTCTGGGGGGATGCCCTCTTT 1692024 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| || |||||| || || ||||| |||||||| || || ||||| | ||||| Sbjct 1692025 GTCTTGAATCTTTGCCTTAACATTTTCAATGGTGTCGGATGCCTCGACCTCCAATGTGAT 1692084 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || || || || ||||| ||||| | ||||||||| Sbjct 1692085 GGTTTTACCAGTCAGCGTCTTCACAAAGATCTGCATTTT 1692123 Score = 118 bits (130), Expect = 2e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || || || ||||| ||||| || || || || | | || | || ||||| ||||| Sbjct 1691462 TGCAGTGTCGACTCCTTTTGAATATTGTAGTCTGACAAAGTGCGACCGTCTTCAAGCTGT 1691521 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || ||||| || || || ||||| || || |||| |||||| ||||| || || || Sbjct 1691522 TTTCCGGCGAAAATGAGACGCTGTTGATCTGGGGGAATTCCTTCTTTGTCTTGAATTTTG 1691581 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||||||||||| || ||||| ||| ||| ||||| || ||||| || || || || Sbjct 1691582 GCCTTCACGTTTTCAATTGTGTCGGAGGCTTCGACCTCAAGTGTGATGGTTTTACCTGTC 1691641 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 ||||| || ||||| | ||||| Sbjct 1691642 AGAGTTTTGACAAAAATTTGCAT 1691664 Score = 111 bits (122), Expect = 4e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || ||||| || || ||||| ||||| || ||||| ||||| | || || | ||| Sbjct 1691677 TCTGAGTACAAGATGCAGTGTGGATTCTTTCTGAATGTTGTAATCTGACAGAGTGCGTCC 1691736 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| || || || || ||||| | | || || || || |||| ||| ||||| Sbjct 1691737 ATCTTCCAATTGTTTTCCAGCAAAGATCAATCTCTGCTGATCTGGTGGAATTCCCTCCTT 1691796 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 || || || || || || || || || || || || |||||||| || || || Sbjct 1691797 ATCTTGAATTTTGGCCTTAACATTCTCAATAGTATCTGAAGACTCAACCTCAAGGGTAAT 1691856 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || |||||||| ||||| | ||||| Sbjct 1691857 GGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 1691892 Score = 107 bits (118), Expect = 4e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || |||||||||||||| || ||||| |||| | || | |||||| Sbjct 1691225 AGTACCAAGTGGAGGGTGGACTCTTTTTGAATATTATAGTCCGACAATGTGCGACCATCT 1691284 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| |||||| || || || || | || || || || || || | |||||| ||||| Sbjct 1691285 TCCAACTGCTTACCAGCAAAAATTAAACGCTGCTGATCTGGTGGGATTCCTTCTTTGTCT 1691344 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || ||||| || ||||| ||| || || || | ||| || || Sbjct 1691345 TGGATCTTGGCCTTGACATTTTCAATTGTGTCTGAGGCCTCGACTTCCAAAGTAATGGTT 1691404 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | || || ||||| | ||||| Sbjct 1691405 TTACCAGTCAATGTTTTAACAAAGATTTGCAT 1691436 >seq256 Length=3517054 Score = 131 bits (144), Expect = 4e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||||| || || || || || || || ||||| | | || | ||||||| Sbjct 130800 AGGACTAAATGAAGGGTAGATTCCTTCTGAATATTGTAATCGGACAATGTACGTCCATCT 130859 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| || || || |||||||| | | ||| ||||| ||||||| ||||||||| || Sbjct 130860 TCCAATTGTTTTCCGGCGAAGATCAATCTTTGCTGGTCTGGAGGAATTCCTTCCTTATCT 130919 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || || || ||||| ||| |||||| |||||||| || ||||| || Sbjct 130920 TGGATTTTGGCCTTGACATTTTCAATGCTGTCAGCCGCATCAACCTCAAGGGTGATGGTT 130979 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| ||||| || || ||||| | |||||||| Sbjct 130980 TTTCCTGTGAGTGTTTTCACAAAGATTTGCATTTT 131014 >seq336 Length=3726090 Score = 109 bits (120), Expect = 1e-18 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 210925 CTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGA 210984 ||||||||||||| ||||| || || | |||||||| | || || || || |||| Sbjct 1528380 CTTTTTGGATGTTGTAATCTTGGAGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAGA 1528439 Query 210985 TAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTT 211044 | | | ||| || || ||||||| ||||||||| || ||||| || || || |||| Sbjct 1528440 TCAATCTTTGCTGATCCGGAGGAATTCCTTCCTTATCTTGGATTTTGGCCTTGACATTTT 1528499 Query 211045 CGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAA 211104 | || || |||||| ||| ||||| | || || || || || || | ||| || |||| Sbjct 1528500 CAATAGTATCAGAGGCTTCGACCTCCAAGGTAATAGTTTTACCAGTCAAAGTTTTGACAA 1528559 Query 211105 ACACCTGCATTTT 211117 | | ||||||||| Sbjct 1528560 AGATCTGCATTTT 1528572 >seq112 Length=1966521 Score = 87.8 bits (96), Expect = 4e-12 Identities = 102/136 (75%), Gaps = 4/136 (3%) Strand=Plus/Plus Query 139397 TTCCTCCAGGAGAACAAGTCTCGAGAGCAATGACAATGTTGACCAACGAACATGGTACAG 139456 |||| ||| ||| ||| |||| |||| | | ||||||| || | ||| |||||||| Sbjct 1589571 TTCCACCAAAAGATCAAATCTCTAGAGTCAGCAAAATGTTGGCCGATGAATTTGGTACAG 1589630 Query 139457 CCTCAAACATTAAGTCGCGAGTCAACAGGCTTTCTGTTCTTGGGGCGAT--CGTCTCTTG 139514 | || || |||||||| ||||||||||| ||||| || ||||| || || ||||| | Sbjct 1589631 CATCCAATATTAAGTCTCGAGTCAACAGACTTTCCGTCCTTGGTGCCATTACGTCTGT-- 1589688 Query 139515 CCAGCAAAAGTTAAAA 139530 ||||| | ||| ||| Sbjct 1589689 ACAGCATAGGTTGAAA 1589704 >seq1 Length=8792355 Score = 87.8 bits (96), Expect = 4e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||||||||| || || ||||| || |||||||| || | ||| || | ||||||| Sbjct 1064686 AGGACAAGGTGAAGGGTTGATTCTTTCTGAATGTTATAGTCTGAAAGTGTGCGTCCATCT 1064627 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 || || || || || || ||||| | | ||| || || ||||||| |||| Sbjct 1064626 TCGAGTTGTTTTCCAGCAAAGATTAATCTTTGCTGATCTGGAGGAATTCCT 1064576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159146697966305