Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq89 147 1e-30 seq123 100 2e-16 seq222 96.9 2e-15 >seq89 Length=3244750 Score = 147 bits (162), Expect = 1e-30 Identities = 159/211 (75%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| ||||| || || |||||||| |||||||| || ||||| ||||| || | | Sbjct 1691209 AATGCAAATTTTTGTCAAGACCCTCACTGGAAAAACTATAACTCTTGAAGTCGAAGCATC 1691150 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||||| | ||| |||||| ||||||||||| | || ||||| || Sbjct 1691149 TGACACAATTGAAAATGTGAAAGCTAAAATTCAGGACAAAGAAGGCATCCCTCCAGACCA 1691090 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||||||||| ||||| || |||||| ||||||| | ||||| || ||||| || Sbjct 1691089 GCAGCGTTTAATTTTTGCTGGTAAACAATTGGAAGATGGTCGCACATTGTCAGATTATAA 1691030 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| ||||||||||| || | || || ||| Sbjct 1691029 CATCCAAAAAGAGTCAACTCTTCACTTGGTT 1690999 Score = 140 bits (154), Expect = 2e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || ||||| || || || ||||| ||||| || || || || || | Sbjct 1691664 ATGCAAATTTTTGTCAAAACTCTGACAGGTAAAACCATCACACTTGAGGTCGAAGCCTCC 1691605 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||||| | || |||||| ||||||||||| | || ||||||||| Sbjct 1691604 GACACAATTGAAAACGTGAAGGCCAAAATTCAAGACAAAGAAGGAATTCCCCCAGATCAA 1691545 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || ||||| ||||| || ||||||| |||||||| || ||||| Sbjct 1691544 CAGCGTCTCATTTTCGCCGGAAAACAGCTTGAAGACGGTCGCACTTTGTCAGACTACAAT 1691485 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTT 23822 || ||||| ||||| ||| | |||||||| || Sbjct 1691484 ATTCAAAAGGAGTCGACACTGCATTTAGTATT 1691453 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || || || || || || || ||||| | || ||||| | | Sbjct 1690980 ATGCAGATTTTTGTCAAGACTCTGACTGGCAAGACTATCACATTGGAGGTTGAAGCTTCT 1690921 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| |||||| | ||| || ||| || ||||| || | || ||||| ||| Sbjct 1690920 GACACTATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAGGGAATCCCACCAGACCAA 1690861 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || ||||| ||||||||||| || || | |||||| || || ||||| Sbjct 1690860 CAGCGTCTCATCTTTGCTGGCAAACAACTTGAGGATGGTCGCACTCTATCTGACTACAAT 1690801 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || |||||||| || || |||||||| ||| | ||||||| || Sbjct 1690800 ATTCAGAAAGAGTCAACTTTGCATTTAGTATTACGTCTGCGAGGTGG 1690754 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || || || || || || || || || || || || ||||| || | Sbjct 1691892 ATGCAAATCTTTGTCAAGACTCTGACTGGCAAGACCATTACCCTTGAGGTTGAGTCTTCA 1691833 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| |||| ||| |||| | |||| || || || || || | || |||||||| Sbjct 1691832 GATACTATTGAGAATGTTAAGGCCAAAA-TTCAAGATAAGGAGGGAATTCCACCAGATCA 1691774 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||| || |||||| ||||||| | ||||||| | |||||||| Sbjct 1691773 GCAGAGATTGATCTTTGCTGGAAAACAATTGGAAGATGGACGCACTCTGTCAGATTACAA 1691714 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || ||||| |||||| | ||| | || | || ||| ||||||| Sbjct 1691713 CATTCAGAAAGAATCCACACTGCATCTTGTACTCAGATTGAGAGGAGG 1691666 Score = 114 bits (126), Expect = 9e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| ||||| || || || || || || ||||| | || ||||| | | Sbjct 1689818 ATGCAGATTTTTGTTAAGACTCTTACTGGTAAGACCATCACATTGGAGGTTGAAGCTTCT 1689759 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||| | ||||| || || ||||| |||||| | || ||||| || Sbjct 1689758 GATACCATTGAGAATGTAAAAGCCAAGATCCAGGACAAGGAAGGTATCCCTCCAGACCAG 1689699 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||||| || ||||| ||||| ||||| || || | || ||| || || ||||| Sbjct 1689698 CAGCGTTTGATTTTTGCTGGCAAGCAACTTGAGGATGGTCGTACTCTATCAGACTACAAT 1689639 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 || ||||||||||| ||| | || ||||| ||| Sbjct 1689638 ATCCAAAAAGAGTCTACACTTCACTTAGTATTA 1689606 Score = 107 bits (118), Expect = 1e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || |||||||| | || || ||||| || ||| | ||||| || || | Sbjct 1691436 ATGCAAATCTTTGTTAAAACATTGACTGGTAAAACCATTACTTTGGAAGTCGAGGCCTCA 1691377 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||||| | || || || ||||||||||| | || |||||||| Sbjct 1691376 GACACAATTGAAAATGTCAAGGCCAAGATCCAAGACAAAGAAGGAATCCCACCAGATCAG 1691317 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||||||||| ||||| || || || ||||||| | ||||| || || || || Sbjct 1691316 CAGCGTTTAATTTTTGCTGGTAAGCAGTTGGAAGATGGTCGCACATTGTCGGACTATAAT 1691257 Query 23791 ATACAAAAAGAGTCCAC 23807 || |||||||||||||| Sbjct 1691256 ATTCAAAAAGAGTCCAC 1691240 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || | || ||||| || ||||| | ||||| || | | Sbjct 1690046 ATGCAGATCTTTGTCAAGACATTGACAGGAAAGACCATCACCTTGGAAGTGGAAGCTTCC 1689987 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| |||||| | || || ||| ||||||||||| | || |||||||| Sbjct 1689986 GACACTATTGAAAATGTCAAGGCCAAGATTCAAGACAAAGAAGGCATTCCTCCAGATCAG 1689927 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || ||||| || ||||| |||||||| | |||||| | || |||||| Sbjct 1689926 CAGCGTCTTATCTTTGCTGGTAAACAGCTGGAAGATGGACGCACACTGTCTGACTACAAC 1689867 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTT 23820 || || || ||||| || | || || ||| Sbjct 1689866 ATCCAGAAGGAGTCGACTCTTCACTTGGTT 1689837 Score = 98.7 bits (108), Expect = 7e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| || || || || || || || ||||| ||||| | || || || | Sbjct 1692123 AAAATGCAGATCTTTGTGAAGACGCTGACTGGTAAAACCATCACATTGGAGGTCGAGGCA 1692064 Query 23668 ACGGACACTGTTG-AAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||||| ||| |||| |||| | ||| ||| |||||||| || | || ||||| Sbjct 1692063 TCCGACACCATTGAAAATGTTAAGGC-AAAGATTCAAGACAAAGAGGGCATCCCCCCAGA 1692005 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || ||| | || || ||||| || || || || ||||| | |||||| || ||||| Sbjct 1692004 CCAGCAGAGATTGATCTTTGCAGGAAAGCAGCTCGAAGATGGACGCACCTTGTCTGATTA 1691945 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||||| || || || |||||| | || | || | || ||| |||| || Sbjct 1691944 TAACATTCAGAAGGAATCCACACTCCACCTTGTACTCAGATTGAGAGGTGG 1691894 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || || || || || || || |||||| | || ||||| | | Sbjct 1690752 ATGCAGATTTTTGTAAAGACTCTTACTGGTAAGACCATCACTTTGGAGGTTGAAGCTTCT 1690693 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| ||| | ||| | ||||| ||||| |||||| | || ||||| || Sbjct 1690692 GATACCATTGAGAATGTGAAAGC-CAAAATCCAGGACAAGGAAGGTATCCCTCCAGACCA 1690634 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||||| |||| ||||| || || || |||| || | ||| || | ||||| || Sbjct 1690633 ACAGCGTCTAATTTTTGCTGGTAAGCAGTTGGAGGATGGACGTACACTCTCAGATTATAA 1690574 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| || || ||||| || | ||||| || Sbjct 1690573 CATTCAGAAGGAGTCAACCCTCCATTTGGT 1690544 >seq123 Length=3260300 Score = 100 bits (110), Expect = 2e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| || || ||||| | || || || || || ||| | |||||||| | Sbjct 712317 AAAATGCAGATCTTTGTCAAAACTTTAACTGGCAAGACCATTACTTTGGAAGTTGAAGCT 712258 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | || ||| |||||| | ||| ||||| |||||||| || | || |||||| Sbjct 712257 TCTGATACTATTGAAAATGTCAAAGCTAAAATCCAAGACAAAGAGGGAATTCCTCCAGAT 712198 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || ||| | || || || || || |||||| ||||||| | |||||| | ||||| Sbjct 712197 CAGCAGAGGTTGATCTTCGCTGGTAAACAATTGGAAGATGGTCGCACTCTTCAAGATTAT 712138 Query 23788 AACATACAAAAAG 23800 || |||||||||| Sbjct 712137 AATATACAAAAAG 712125 >seq222 Length=7060343 Score = 96.9 bits (106), Expect = 2e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || ||||||||||| |||||||| | || || || || ||||| | || ||||| || Sbjct 1554051 AATATGCAGATTTTTGTTAAAACTTTGACTGGTAAGACCATCACCTTGGAGGTTGAGGCC 1553992 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | |||||| |||||| | || ||||| || |||||||| | || |||||| Sbjct 1553991 TCTGACACTATTGAAAATGTCAAGGCTAAAATCCAGGATAAAGAAGGAATCCCTCCAGAT 1553932 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | || || |||||||| |||||| ||||||| | || || | |||||| Sbjct 1553931 CAGCAAAGATTGATCTTTGCCGGTAAACAATTGGAAGATGGTCGTACCCTTCAAGATTAC 1553872 Query 23788 AACATACAAAAAG 23800 || || || |||| Sbjct 1553871 AATATCCAGAAAG 1553859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008129341356