Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq89 134 3e-26 seq336 118 3e-21 seq256 118 3e-21 seq123 100 7e-16 seq222 98.7 2e-15 >seq89 Length=3244750 Score = 134 bits (148), Expect = 3e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| || ||||||||||| |||||||| || || | || ||||| | ||| || | || Sbjct 1691905 TCTGAGTACAAGGTGGAGTGTGGATTCCTTCTGAATGTTATAATCAGACAAGGTGCGTCC 1691964 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| |||||||| || || ||||| | || || ||||| || || || || || || Sbjct 1691965 ATCTTCGAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGGTCTGGGGGGATGCCCTCTTT 1692024 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| |||||| ||| ||| ||| |||||||| || | || || || || ||||| Sbjct 1692025 GTCTTGAATCTTTGCCTTAACATTTTCAATGGTGTCGGATGCCTCGACCTCCAATGTGAT 1692084 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || || || |||| || || | || | |||||||| Sbjct 1692085 GGTTTTACCAGTCAGCGTCTTCACAAAGATCTGCATTTT 1692123 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | |||||| ||||| |||||||| | ||| || || | ||| || | |||||| Sbjct 1691225 AGTACCAAGTGGAGGGTGGACTCTTTTTGAATATTATAGTCCGACAATGTGCGACCATCT 1691284 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| ||||| || || | || || || || || || || ||||| |||||| Sbjct 1691285 TCCAACTGCTTACCAGCAAAAATTAAACGCTGCTGATCTGGTGGGATTCCTTCTTTGTCT 1691344 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||| || |||||||||| || || || || || || || Sbjct 1691345 TGGATCTTGGCCTTGACATTTTCAATTGTGTCTGAGGCCTCGACTTCCAAAGTAATGGTT 1691404 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| ||||| | || | |||||| Sbjct 1691405 TTACCAGTCAATGTTTTAACAAAGATTTGCAT 1691436 Score = 111 bits (122), Expect = 4e-19 Identities = 138/189 (73%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 ||| || || || |||||||||| |||||| || | | ||| | ||||| || || || Sbjct 1689615 GTGAAGTGTAGACTCTTTTTGGATATTGTAGTCTGATAGAGTACGACCATCCTCAAGTTG 1689674 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 ||| ||||| || || | || || ||||| || || |||||||||||||| |||||||| Sbjct 1689675 CTTGCCAGCAAAAATCAAACGCTGCTGGTCTGGAGGGATACCTTCCTTGTCCTGGATCTT 1689734 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 || ||| || ||||| || || | ||| || || || ||||| ||||| || || Sbjct 1689735 GGCTTTTACATTCTCAATGGTATCAGAAGCTTCAACCTCCAATGTGATGGTCTTACCAGT 1689794 Query 225690 CAAAGTTTT 225698 | ||| || Sbjct 1689795 AAGAGTCTT 1689803 Score = 111 bits (122), Expect = 4e-19 Identities = 160/223 (72%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || | ||||| || || || || || | || ||||| | | || Sbjct 1690531 ACGCAGACGCAGCACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAATCTGAGAGTGT 1690590 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || | |||||| ||||| || || || || |||||||| || || ||||| Sbjct 1690591 ACGTCCATCCTCCAACTGCTTACCAGCAAAAATTAGACGCTGTTGGTCTGGAGGGATACC 1690650 Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 ||||||||| ||||| ||| || |||||| || ||||| || || | ||| || || | Sbjct 1690651 TTCCTTGTCCTGGAT-TTTGGCTTTCACATTCTCAATGGTATCAGAAGCTTCAACCTCCA 1690709 Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 | ||||| ||||| || || | ||| |||| || | ||||| Sbjct 1690710 AAGTGATGGTCTTACCAGTAAGAGTCTTTACAAAAATCTGCAT 1690752 Score = 111 bits (122), Expect = 4e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| || ||||| || || ||||||||||| || | |||||||| | || ||| | || Sbjct 1691677 TCTGAGTACAAGATGCAGTGTGGATTCTTTCTGAATGTTGTAATCTGACAGAGTGCGTCC 1691736 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| | || || ||||| ||||| | || || || || || ||||| || ||||| Sbjct 1691737 ATCTTCCAATTGTTTTCCAGCAAAGATCAATCTCTGCTGATCTGGTGGAATTCCCTCCTT 1691796 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||||| || || ||| ||| || || || ||||| | || || || | || || Sbjct 1691797 ATCTTGAATTTTGGCCTTAACATTCTCAATAGTATCTGAAGACTCAACCTCAAGGGTAAT 1691856 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||| |||| ||| || | || | |||||| Sbjct 1691857 GGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 1691892 >seq336 Length=3726090 Score = 118 bits (130), Expect = 3e-21 Identities = 142/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 225524 CTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGA 225583 ||||||||| |||||||| | ||| | |||||||||| || || ||||| |||| Sbjct 1528380 CTTTTTGGATGTTGTAATCTTGGAGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAGA 1528439 Query 225584 TAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTT 225643 | | || ||| || || || ||||| |||||||| |||||||| || ||| ||| || Sbjct 1528440 TCAATCTTTGCTGATCCGGAGGAATTCCTTCCTTATCTTGGATTTTGGCCTTGACATTTT 1528499 Query 225644 CGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGA 225703 | || || || |||| ||| || || || || || || || || ||||||||||| | | Sbjct 1528500 CAATAGTATCAGAGGCTTCGACCTCCAAGGTAATAGTTTTACCAGTCAAAGTTTTGACAA 1528559 Query 225704 ACACTTGCATTTT 225716 | | |||||||| Sbjct 1528560 AGATCTGCATTTT 1528572 >seq256 Length=3517054 Score = 118 bits (130), Expect = 3e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | || || || ||||| || || | ||||||||||| ||| || | |||||| Sbjct 130800 AGGACTAAATGAAGGGTAGATTCCTTCTGAATATTGTAATCGGACAATGTACGTCCATCT 130859 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | || || || |||||||| | || ||| ||||| || ||||| |||||||| ||| Sbjct 130860 TCCAATTGTTTTCCGGCGAAGATCAATCTTTGCTGGTCTGGAGGAATTCCTTCCTTATCT 130919 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||| || ||| ||| ||| ||| |||| | | || || || | ||||| || Sbjct 130920 TGGATTTTGGCCTTGACATTTTCAATGCTGTCAGCCGCATCAACCTCAAGGGTGATGGTT 130979 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || || || | ||||| | || | ||||||||| Sbjct 130980 TTTCCTGTGAGTGTTTTCACAAAGATTTGCATTTT 131014 >seq123 Length=3260300 Score = 100 bits (110), Expect = 7e-16 Identities = 140/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 225524 CTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGA 225583 ||||||| | ||| ||||| | ||| | |||||||| | || || |||||||||| Sbjct 712125 CTTTTTGTATATTATAATCTTGAAGAGTGCGACCATCTTCCAATTGTTTACCAGCGAAGA 712184 Query 225584 TAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC-TTCACAGCT 225642 | | | || || || || ||||| || || ||||||||||| ||| || || ||| | Sbjct 712185 TCAACCTCTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGGAT-TTTAGCTTTGACATTT 712243 Query 225643 TCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATG 225702 || || || || || | ||| || || || || || |||||||| || |||||||| | Sbjct 712244 TCAATAGTATCAGAAGCTTCAACTTCCAAAGTAATGGTCTTGCCAGTTAAAGTTTTGACA 712303 Query 225703 AACACTTGCATTTT 225716 || | |||||||| Sbjct 712304 AAGATCTGCATTTT 712317 >seq222 Length=7060343 Score = 98.7 bits (108), Expect = 2e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225524 CTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGA 225583 |||| |||| ||||||||| | || | |||||||| | || || || || |||| Sbjct 1553859 CTTTCTGGATATTGTAATCTTGAAGGGTACGACCATCTTCCAATTGTTTACCGGCAAAGA 1553918 Query 225584 TAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTT 225643 | | || ||| || || || || || ||||| || || ||||| || ||| ||| || Sbjct 1553919 TCAATCTTTGCTGATCTGGAGGGATTCCTTCTTTATCCTGGATTTTAGCCTTGACATTTT 1553978 Query 225644 CGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGA 225703 | || ||||| |||| || || || || ||||| ||||| || ||||||||||| | | Sbjct 1553979 CAATAGTGTCAGAGGCCTCAACCTCCAAGGTGATGGTCTTACCAGTCAAAGTTTTAACAA 1554038 Query 225704 ACACTTGCATTTTATGG 225720 | | ||||| || ||| Sbjct 1554039 AAATCTGCATATTGTGG 1554055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192525745287758