Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq34 199 3e-46 >seq34 Length=2688268 Score = 199 bits (220), Expect = 3e-46 Identities = 371/541 (69%), Gaps = 4/541 (1%) Strand=Plus/Plus Query 4583 AATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATAT 4642 ||| ||||| || || || | ||| ||||||||||||| ||| || | ||||||||| Sbjct 1149199 AATTAGTTCATTGCTGAAAGTAAGTCCTGGCATTAAACCTCGCTTCTTCAACCAAAATAT 1149258 Query 4643 AGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGA 4702 || ||||| ||| ||||| || ||||| || || ||||| |||| | ||| Sbjct 1149259 GGCAGCAAAACTACCACTGAAGAAAATTCCTTCAACAGCTGCAAAAGCTATAACTCGCTC 1149318 Query 4703 CCCGAACG-AGCTGGCTT-TGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTA 4760 | || | ||| ||| || || ||||| || | |||||||||||||| || || Sbjct 1149319 AGCAAATGTAGCACTCTTATGACTG--ATCCAGTTCATAGCCCAGTTAGCTTTCTTGGTA 1149376 Query 4761 ACGCACGGAATTGTGTATATAGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATA 4820 || || || | || | || || || || || | | | | |||| || ||| Sbjct 1149377 ACACAAGGTAGAGTTTCAATTGCATTGAACAAGTAGTCCCTCTGAGATGGATCAGTAATG 1149436 Query 4821 TAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAAT 4880 || || || || || || ||||||||| || || | |||||| || || | || || Sbjct 1149437 TAGGTATCAATAAGAAGTGAATACATTTCTGAGTGCACATTTTCCATGGCTACTTGGAAG 1149496 Query 4881 CCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTT 4940 || || ||||| | ||| || || ||||||||||| | | |||| || || | ||| Sbjct 1149497 CCATAGAAGCAGCGAGCCTCAGTGACTTGAACTTCCTGGCTGAATCGCTCAACGAGATTT 1149556 Query 4941 TCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGT 5000 || || || || || ||| ||| ||||| || || || |||||||| ||||| | | Sbjct 1149557 TCATTGACAATGCCATCAGAGGCAGCAAAGAATGCTAATACATGAGAAATAAAATGTTTC 1149616 Query 5001 TCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACA 5060 |||| || | ||| ||| | | ||| ||| || | ||| || |||||||| || Sbjct 1149617 TCGTTGTCATTCAACTTTGCCCAATCGTGCATATCCTTTGATAAGTCTACTTCTTCGACC 1149676 Query 5061 GTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGA 5120 |||||||| || || || ||||| |||||||| |||||||||||| | ||||| ||| Sbjct 1149677 GTCCAAAATGAAGCCTCAGCTTTCTTGTACATGTGCCAAATATCAGGCCATTGAATGGGA 1149736 Query 5121 A 5121 | Sbjct 1149737 A 1149737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427047741933881