Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq211 145 6e-30 >seq211 Length=1509898 Score = 145 bits (160), Expect = 6e-30 Identities = 178/243 (73%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 ||||||| ||||| || || || |||||||| ||||| ||||| ||||| |||| ||| Sbjct 51119 CATGTCCACGTACTTGGCCCCAAAGTGCCTCCACTGGAAGCCGTAAACCGGGCCCAAGTC 51060 Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608 || | || | | | |||||| | || | ||| || | || |||||||||| Sbjct 51059 GCCGACCTCGCGATCCCGGAAGCCGAGCGAATCGAGAAACTCGCGAGACGCGTTGGCGTC 51000 Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCA 27668 ||| || || | || || |||||||||| |||| ||| || || || | || |||||| Sbjct 50999 CCAAATTTTAATACCTTTGGCGGAGAGCTCGTTGGCGTTGGTCGAGCCACGGATGAACCA 50940 Query 27669 CAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAACTG 27728 ||||||||||| ||||||| |||||| || ||||||||||| || || ||||| || Sbjct 50939 GAGCAGCTCCTCGGCGACGGCGCGCCAAAATACTCTCTTGGTCGTCAGAAGCGGAAATTG 50880 Query 27729 TCC 27731 || Sbjct 50879 GCC 50877 Score = 131 bits (144), Expect = 1e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 27217 ACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGC 27276 ||||| || |||||| | ||||| || |||||| ||| ||||| ||||| ||||| || Sbjct 51455 ACGTGCGCTATCATGCAGGTGAGCAGCGAGTAGGAGGCAATGTTGAAGGGCACCCCCAGA 51396 Query 27277 CCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACGTAAAAC 27336 |||||||| || | ||||||||| | ||||| |||||||| || | || ||||||||| Sbjct 51395 CCCATGTCGCCGGCCCTCTGGTACAAGTGACAGGAGAGCTCGCCGTTGCAGACGTAAAAC 51336 Query 27337 TGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCG 27396 || | | |||||| || || || ||||| | ||| || ||||||||| Sbjct 51335 TGGGCCAGCGAGTGGCAGGGCGGCAGGGCCATCTTCGGGATGTCGACCGGATTCCAGGCG 51276 Query 27397 CACACGATGATGCGCCTGTCTTCTGGGTTGTT 27428 | || ||||||||| ||||| || || || || Sbjct 51275 CTCATGATGATGCGTCTGTCGTCGGGATTATT 51244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369505592297267