Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq34 214 2e-50 seq56 140 5e-28 >seq34 Length=2688268 Score = 214 bits (236), Expect = 2e-50 Identities = 397/578 (69%), Gaps = 11/578 (2%) Strand=Plus/Plus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 ||||| | | ||||| ||| || || || || || ||||||| || || || || Sbjct 1149188 TCATCGCGAGAAATTAGTTCATTGCTGAAAGTAAGTCCTGGCATTAAACCTCGCTTCTTC 1149247 Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCG 48284 | ||||||||| || || ||| ||| ||||| || ||||| || || ||||| || Sbjct 1149248 AACCAAAATATGGCAGCAAAACTACCACTGAAGAAAATTCCTTCAACAGCTGCAAAAGCT 1149307 Query 48285 GTAAGTCTCTCTCCGTAACTG--GCTTCGTTGTGT---ATCCACCGTTGT--GCCCAATC 48337 ||| ||| ||| | || || || || || ||||| ||| ||||| | Sbjct 1149308 ATAA--CTCGCTCAGCAAATGTAGCACTCTTATGACTGATCCA--GTTCATAGCCCAGTT 1149363 Query 48338 AGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATT 48397 ||| ||||| | |||||||| | ||||| || ||||| || | ||| | | | Sbjct 1149364 AGCTTTCTTGGTAACACAAGGTAGAGTTTCAATTGCATTGAACAAGTAGTCCCTCTGAGA 1149423 Query 48398 GCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAAT 48457 ||| ||| ||| ||||| || | ||| ||||||||| ||||| | |||||| || Sbjct 1149424 TGGATCAGTAATGTAGGTATCAATAAGAAGTGAATACATTTCTGAGTGCACATTTTCCAT 1149483 Query 48458 TGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCG 48517 || | || || || || || || | || || |||| || || ||| | ||||| Sbjct 1149484 GGCTACTTGGAAGCCATAGAAGCAGCGAGCCTCAGTGACTTGAACTTCCTGGCTGAATCG 1149543 Query 48518 TTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTT 48577 ||| | | ||| ||||| || || |||||| |||||||| |||||||||||||| Sbjct 1149544 CTCAACGAGATTTTCATTGACAATGCCATCAGAGGCAGCAAAGAATGCTAATACATGAGA 1149603 Query 48578 AATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATC 48637 |||||||| ||| |||||| | ||| || ||| || | ||||| ||||||| || Sbjct 1149604 AATAAAATGTTTCTCGTTGTCATTCAACTTTGCCCAATCGTGCATATCCTTTGATAAGTC 1149663 Query 48638 TACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACT 48697 ||||||||| | ||||||||||| ||||| ||||| || ||||| | ||| |||||| Sbjct 1149664 TACTTCTTCGACCGTCCAAAATGAAGCCTCAGCTTTCTTGTACATGTGCCAAATATCAGG 1149723 Query 48698 GTATTGGATTGGGAAAATAACAAATCTATTTGGATTTT 48735 |||| || || || || || || | | ||||||| Sbjct 1149724 CCATTGAATGGGAAAGATCACGAAACGAGAAGGATTTT 1149761 >seq56 Length=4197193 Score = 140 bits (154), Expect = 5e-28 Identities = 226/317 (71%), Gaps = 10/317 (3%) Strand=Plus/Minus Query 78069 TTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGA 78128 || |||||||| ||||| ||||| ||||| || | ||| || | |||||| ||||| ||| Sbjct 1120525 TTACCTGTATTTTTTTTGAGATCAAGAAATTCAAAAATGTCCGCATGCCAAGGTTCAAGA 1120466 Query 78129 TATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTA 78188 || ||||| | | |||| || | ||||||||||| || || | ||| | || |||||| Sbjct 1120465 TACATTGCAAAAGCTCCTGGCCTCTTATTACCTCCTTGGTCAACATAGCGTGCTGTGTTA 1120406 Query 78189 TTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAA 78248 ||||| ||||| ||||| |||| | ||| ||||| |||||||||||| | ||| | Sbjct 1120405 TTATACACTCTTAACATAGGAACTAAACCATTAGAAACTCCATTTGTTCCGGCAAT-TCT 1120347 Query 78249 CTTCCACTTGCGCGAATATTACTAATGGATA-TC---CCTATTCCTCCTGCCATCTTAGA 78304 | | |||| || ||| |||| | || || || ||||| || ||| Sbjct 1120346 TGTACCCTTG-GCTCTGATT--GTGTGGACACTCAAACCAATGCCTCCAGCAGATTTACT 1120290 Query 78305 TATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCA-TGT 78363 || |||||| || | || ||||| || || ||||| || ||||| || || ||| ||| Sbjct 1120289 TACTAGAGCACATCTCTTTAATGTGTCATAAATACCTTCAATACTATCTTCAGTCATTGT 1120230 Query 78364 TAAGAAGAAAACAGCTA 78380 || ||| || |||||| Sbjct 1120229 CAACAAG-AAGCAGCTA 1120214 Score = 134 bits (148), Expect = 2e-26 Identities = 184/257 (72%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 77052 ATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGA 77111 |||||| |||||| || || |||| ||| | | || || || || || | | ||| Sbjct 1121853 ATAATTTCATTCTTCATGTCTTCATCCCAAAGATCTCTTTCAGTCAAGTCTTTCAAAAGA 1121794 Query 77112 TGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTA 77171 |||||||| || ||||| ||||||||||| || ||||| || | |||||||||||||| Sbjct 1121793 TGAGGATTGACGATTTGGAATTCTCCAGATAAGACTCTTCGTGAATAAATATTACTGGTG 1121734 Query 77172 TATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGT 77231 || || || | |||||| || ||||| | ||||| || || || ||||| ||||| ||| Sbjct 1121733 TAAGGCTCTATAGATTCGTTATTTCCAAGTATTTGTGCTGTCGATGCAGTAGGCATTGGT 1121674 Query 77232 GCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAA 77291 || | | ||| |||||| | |||| | ||||| |||| | | | |||| Sbjct 1121673 GCAAGAAGTAATGAATTTCTCACTCCATATTGAGCAATTTTTGCTTTCAAAGCTGCCCAA 1121614 Query 77292 TCCCAAAGATCTGAAGG 77308 ||||| |||| || ||| Sbjct 1121613 TCCCAGAGATTTGTAGG 1121597 Score = 114 bits (126), Expect = 2e-20 Identities = 145/198 (73%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 78451 GTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACAC 78510 |||| ||||||||||||||| || || | | || ||||| | || || || | Sbjct 1120081 GTAG-TTGTATGTTTCAATAACTTTATCAAGATTTTCTTCATGAACAGCAACAGCGACTC 1120023 Query 78511 GCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATT 78570 ||| | ||||||||| ||||||||||| || ||| |||||||| || || | Sbjct 1120022 TCATGAGCATATGCTGTGGTCTTTCAACAACTTTGCCATTGATTTTCAATAAATAGCTTC 1119963 Query 78571 TTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAG 78630 | ||||| |||||||| ||||| ||||| ||| ||| ||||| || || ||||| ||| Sbjct 1119962 TCTCCAATGTTTTAAATCCAAAGTAGTTATATCCAAAATCTCTGTCATAGATAATTGCAG 1119903 Query 78631 AATTTAGTTTATCTTTGT 78648 |||| | ||||||||||| Sbjct 1119902 AATTCAATTTATCTTTGT 1119885 Score = 105 bits (116), Expect = 9e-18 Identities = 186/272 (68%), Gaps = 12/272 (4%) Strand=Plus/Minus Query 77524 TACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAA 77583 ||||||| || || ||||| ||||| | ||||| ||| || ||||| ||||| | Sbjct 1121225 TACCAATGGGCCTGTGTCTGAAGTTGGAGTTCTTAGCCTCTTTGATGGGATAGTAATTGA 1121166 Query 77584 TGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAA 77643 ||||||| || ||| | |||||| | | || || | || || || | ||| | | Sbjct 1121165 TGTCTATTATCCTATCTAAATTTCTGGTAGCAACCTTGGCAACTTCTTTCAATTTCATGA 1121106 Query 77644 AATCAAATCTTCC---------ATCTATA---ACAAACATGTTCAAAGCTATAGATGCTA 77691 | ||| || | | || ||| |||||||| || | ||| || ||||| | Sbjct 1121105 AGTCATATGTGCGTTGATTTGGATTTATTTGGACAAACATATTAACAGCAATTGATGCCA 1121046 Query 77692 GATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTAC 77751 |||||||||||| || |||| || | || |||| | ||| ||||||| ||||| Sbjct 1121045 AATTACAAACTGCCACTTCATCAGGTGATGAGTACTGTACAACCTCAGTACATAAATTAC 1120986 Query 77752 TACATTTGATAGTGCCCAGATTTTGTTGGTTG 77783 ||| | |||| ||||||| ||||||||| ||| Sbjct 1120985 TACTTCTGATTGTGCCCAAATTTTGTTGATTG 1120954 Score = 104 bits (114), Expect = 3e-17 Identities = 125/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 76848 CTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATA 76907 ||||| || ||||| |||||| || ||||| | |||| | || ||||| | | Sbjct 1122143 CTCCAACCATAGAAGTGCATGGACGTAAGTTTTTCAGTCGTAGGTTTAGCCATATGTACA 1122084 Query 76908 TTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTC 76967 || | || ||| |||||| ||||||||||||||||| || |||||||| | ||| ||| Sbjct 1122083 TTGAGAGATTGAGATTGATCAATGAAAGCTCCTCTATCTGCAGCCATTTTCAAAATAGTC 1122024 Query 76968 TTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGG 77017 ||||| | |||||||||| ||| || | | |||||| | ||| || || Sbjct 1122023 TTTTGGGATATTTCCCAAACAGTCTTATATAGTTGTTTCAGATCGTCGGG 1121974 Score = 86.0 bits (94), Expect = 9e-12 Identities = 116/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 77914 TATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGC 77973 |||| ||| |||||||| || ||||| ||||| ||| || || ||||||| || | Sbjct 1120757 TATAAAGCTTGTCAAATTCTTCACCCCATACATCTGGCAAGCCTGGACATTCATGAGGAC 1120698 Query 77974 ACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATA 78033 ||||||| ||| | |||| || |||| || ||| || | ||| || ||||| | Sbjct 1120697 ACATCAAACTCCATTTTCCATTATCAAAGACTCTTTGCATGAATAAATCTGGGATCCACA 1120638 Query 78034 GAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTG 78075 |||| || || |||| || |||||||||||| || |||| Sbjct 1120637 AAGCATAGAAAAGTTCTCTGGCTCTATGTTCTTCTTTGCCTG 1120596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694665700040480