Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq34 206 4e-48 seq56 141 1e-28 >seq34 Length=2688268 Score = 206 bits (228), Expect = 4e-48 Identities = 393/576 (68%), Gaps = 7/576 (1%) Strand=Plus/Plus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 ||||| | | ||||| ||| || || || || || ||||||| || ||||| || Sbjct 1149188 TCATCGCGAGAAATTAGTTCATTGCTGAAAGTAAGTCCTGGCATTAAACCTCGCTTCTTC 1149247 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 | ||||||||| || || ||| ||| ||||| || ||||| ||||| || || || Sbjct 1149248 AACCAAAATATGGCAGCAAAACTACCACTGAAGAAAATTCCTTCAACAGCTGCAAAAGCT 1149307 Query 46774 ACAAGTCTCTCTCCGTAACTG--GCATCATTATGA---ATCCACCTTTGAGCCCAATCAG 46828 | || ||| ||| | || || ||| |||||| ||||| | |||||| | || Sbjct 1149308 ATAA--CTCGCTCAGCAAATGTAGCACTCTTATGACTGATCCAGTTCATAGCCCAGTTAG 1149365 Query 46829 CCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCAC 46888 | || || | |||||||| | ||||| || ||||| || | ||| | | | Sbjct 1149366 CTTTCTTGGTAACACAAGGTAGAGTTTCAATTGCATTGAACAAGTAGTCCCTCTGAGATG 1149425 Query 46889 TATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAG 46948 ||| ||| || ||||| || | ||| |||||||||||| || | ||||| || | Sbjct 1149426 GATCAGTAATGTAGGTATCAATAAGAAGTGAATACATTTCTGAGTGCACATTTTCCATGG 1149485 Query 46949 CCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTT 47008 | | || || || || || || | || ||||| | || || || | ||||| | Sbjct 1149486 CTACTTGGAAGCCATAGAAGCAGCGAGCCTCAGTGACTTGAACTTCCTGGCTGAATCGCT 1149545 Query 47009 CAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAA 47068 || | ||| ||||| || || |||||| |||||||| ||||| |||||||| || Sbjct 1149546 CAACGAGATTTTCATTGACAATGCCATCAGAGGCAGCAAAGAATGCTAATACATGAGAAA 1149605 Query 47069 TAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTA 47128 |||||| ||| || | | | ||| || ||| || | ||||| ||||||| |||| Sbjct 1149606 TAAAATGTTTCTCGTTGTCATTCAACTTTGCCCAATCGTGCATATCCTTTGATAAGTCTA 1149665 Query 47129 CTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGAT 47188 ||||||| | ||||| ||||| ||||| ||||| || ||||| | ||| |||||| | Sbjct 1149666 CTTCTTCGACCGTCCAAAATGAAGCCTCAGCTTTCTTGTACATGTGCCAAATATCAGGCC 1149725 Query 47189 ATTGGATCGGAAAAATAACAAATCTATTTGGATTTT 47224 |||| || ||||| || || || | | ||||||| Sbjct 1149726 ATTGAATGGGAAAGATCACGAAACGAGAAGGATTTT 1149761 >seq56 Length=4197193 Score = 141 bits (156), Expect = 1e-28 Identities = 183/253 (72%), Gaps = 0/253 (0%) Strand=Plus/Minus Query 75647 ATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGA 75706 |||||| |||||| || || |||| ||| | | ||| || || || || | | ||| Sbjct 1121853 ATAATTTCATTCTTCATGTCTTCATCCCAAAGATCTCTTTCAGTCAAGTCTTTCAAAAGA 1121794 Query 75707 TGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTA 75766 |||||||| || ||||| ||||||||||| || |||||||| | |||||||||||||| Sbjct 1121793 TGAGGATTGACGATTTGGAATTCTCCAGATAAGACTCTTCGTGAATAAATATTACTGGTG 1121734 Query 75767 TATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGT 75826 || || || | |||||| || ||||| | ||||| || || || ||||| ||||| ||| Sbjct 1121733 TAAGGCTCTATAGATTCGTTATTTCCAAGTATTTGTGCTGTCGATGCAGTAGGCATTGGT 1121674 Query 75827 GCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAA 75886 || | | ||| |||||| | |||| | ||||| |||| | | | |||| Sbjct 1121673 GCAAGAAGTAATGAATTTCTCACTCCATATTGAGCAATTTTTGCTTTCAAAGCTGCCCAA 1121614 Query 75887 TCCCAAAGATCTG 75899 ||||| |||| || Sbjct 1121613 TCCCAGAGATTTG 1121601 Score = 125 bits (138), Expect = 1e-23 Identities = 217/313 (69%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 76664 TTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGA 76723 || |||||||| ||||| ||||| || || || | ||| || | |||||| ||||| ||| Sbjct 1120525 TTACCTGTATTTTTTTTGAGATCAAGAAATTCAAAAATGTCCGCATGCCAAGGTTCAAGA 1120466 Query 76724 TATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTA 76783 || || || | | | || || | ||||||||||| || || | ||| | || |||||| Sbjct 1120465 TACATTGCAAAAGCTCCTGGCCTCTTATTACCTCCTTGGTCAACATAGCGTGCTGTGTTA 1120406 Query 76784 TTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAA 76843 ||||| ||||| ||||| |||| | || ||||| ||||||||||| | ||| Sbjct 1120405 TTATACACTCTTAACATAGGAACTAAACCATTAGAAACTCCATTTGTTCCGGCAATTCTT 1120346 Query 76844 CTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATT 76903 | || || | || | | | | || || ||||| || |||| | | Sbjct 1120345 GTACCCTTGGCTCTGATTGTGTGGACACTCAAACCAATGCCTCCAGCAGATTTACTTACT 1120286 Query 76904 AGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCA-TGTTAAG 76962 |||||||| | || ||||||||||| || || || |||||||| || ||| ||| || Sbjct 1120285 AGAGCACATCTCTTTAATGTGTCATAAATACCTTCAATACTATCTTCAGTCATTGTCAAC 1120226 Query 76963 AAGAAAACAGCTA 76975 ||| || |||||| Sbjct 1120225 AAG-AAGCAGCTA 1120214 Score = 111 bits (122), Expect = 2e-19 Identities = 143/196 (73%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 77046 GTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACAC 77105 |||| |||||||||||||||||| || | || || ||||| | |||||||| | Sbjct 1120081 GTAG-TTGTATGTTTCAATAACTTTATCAAGATTTTCTTCATGAACAGCAACAGCGACTC 1120023 Query 77106 GCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATT 77165 ||| | ||||||||| |||| ||| ||| || ||| |||||||| || || | Sbjct 1120022 TCATGAGCATATGCTGTGGTCTTTCAACAACTTTGCCATTGATTTTCAATAAATAGCTTC 1119963 Query 77166 TTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCG 77225 | ||||| |||||||| ||||| ||||| ||| ||| ||||| || || ||||| | | Sbjct 1119962 TCTCCAATGTTTTAAATCCAAAGTAGTTATATCCAAAATCTCTGTCATAGATAATTGCAG 1119903 Query 77226 AATTTAGTTTGTCCTT 77241 |||| | ||| || || Sbjct 1119902 AATTCAATTTATCTTT 1119887 Score = 109 bits (120), Expect = 8e-19 Identities = 114/150 (76%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 77347 tttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTC 77406 ||| || ||||| || |||| ||| || | |||||||||||||||| |||||||||||| Sbjct 1119695 TTTCTTGGTTTCTTTATGTAAATTTGAGATTGCTATTCTAGCAGCTAAAATTGCATAGTC 1119636 Query 77407 AGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAATTCTATAGT 77466 | ||||| |||||| ||||| || |||| || ||||| |||| | ||| | ||| Sbjct 1119635 TGCATGTTTTGTAGTCATTGTGGCAGCGGTTTCAGCAGCTAAGTTATCAAGTTCCACAGT 1119576 Query 77467 AGTAACTCCGTTATATAGCCCTTGAATAAC 77496 |||||||| ||| ||||| | ||||| Sbjct 1119575 TGTAACTCCAGAATAAAGCCCATTGATAAC 1119546 Score = 100 bits (110), Expect = 4e-16 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 75443 CTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATA 75502 ||||| || ||||| |||||| || ||||| | | || | || ||||| | | Sbjct 1122143 CTCCAACCATAGAAGTGCATGGACGTAAGTTTTTCAGTCGTAGGTTTAGCCATATGTACA 1122084 Query 75503 TTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTC 75562 || | || ||| |||||| ||||||||||||||||| || |||||||| | ||| ||| Sbjct 1122083 TTGAGAGATTGAGATTGATCAATGAAAGCTCCTCTATCTGCAGCCATTTTCAAAATAGTC 1122024 Query 75563 TTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGG 75612 ||||| | |||||||||| ||| || | | |||||| | ||| || || Sbjct 1122023 TTTTGGGATATTTCCCAAACAGTCTTATATAGTTGTTTCAGATCGTCGGG 1121974 Score = 89.7 bits (98), Expect = 7e-13 Identities = 218/331 (66%), Gaps = 12/331 (4%) Strand=Plus/Minus Query 76119 TACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAA 76178 ||||||| || || ||||| ||||| | | ||| ||| || || || ||||| | Sbjct 1121225 TACCAATGGGCCTGTGTCTGAAGTTGGAGTTCTTAGCCTCTTTGATGGGATAGTAATTGA 1121166 Query 76179 TATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAA 76238 | ||||| || ||| | ||||||| | | || || | || || || | ||| | | Sbjct 1121165 TGTCTATTATCCTATCTAAATTTCTGGTAGCAACCTTGGCAACTTCTTTCAATTTCATGA 1121106 Query 76239 AATCAAAT---------TTTCCATCTATC---ACAAACATATTAAGAGCTATAGATGCTA 76286 | ||| || ||| || ||| ||||||||||||| ||| || ||||| | Sbjct 1121105 AGTCATATGTGCGTTGATTTGGATTTATTTGGACAAACATATTAACAGCAATTGATGCCA 1121046 Query 76287 GATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTAC 76346 ||||||||| || || |||| || | || |||| | ||| || |||| ||||| Sbjct 1121045 AATTACAAACTGCCACTTCATCAGGTGATGAGTACTGTACAACCTCAGTACATAAATTAC 1120986 Query 76347 TACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAA 76406 ||| |||| || || | ||||||||| ||| || ||||| | || || || | Sbjct 1120985 TACTTCTGATTGTGCCCAAATTTTGTTGATTGGATTTACGATTACAAGCATCTTTGTATA 1120926 Query 76407 GAACAAACGGAGTTCCAGTTTCAATCTGTGA 76437 | | || ||||||||||| | ||||| Sbjct 1120925 ACATGTATGGTGTTCCAGTTTCTACTTGTGA 1120895 Score = 84.2 bits (92), Expect = 3e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 |||||||| || ||||| ||||| ||| || |||||||||| ||||||||||| | Sbjct 1120746 TCAAATTCTTCACCCCATACATCTGGCAAGCCTGGACATTCATGAGGACACATCAAACTC 1120687 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || | |||| || || | || ||| || | ||| || ||||| | |||| || Sbjct 1120686 CATTTTCCATTATCAAAGACTCTTTGCATGAATAAATCTGGGATCCACAAAGCATAGAAA 1120627 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTG 76670 || |||| || |||| ||||||| || |||| Sbjct 1120626 AGTTCTCTGGCTCTATGTTCTTCTTTGCCTG 1120596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712931218530240