Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq89 132 1e-25 seq256 131 4e-25 seq336 100 7e-16 >seq89 Length=3244750 Score = 132 bits (146), Expect = 1e-25 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 |||||| |||||||| || || || ||||| || ||||||||||| | | ||| | || Sbjct 1691677 TCTGAGTACAAGATGCAGTGTGGATTCTTTCTGAATGTTGTAATCTGACAGAGTGCGTCC 1691736 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||| | ||| || || ||||| | |||||||| || | | ||||| ||||| Sbjct 1691737 ATCTTCCAATTGTTTTCCAGCAAAGATCAATCTCTGCTGATCTGGTGGAATTCCCTCCTT 1691796 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||||||||| || ||| |||| | | |||||| ||| || ||||| ||||| Sbjct 1691797 ATCTTGAATTTTGGCCTTAACATTCTCAATAGTATCTGAAGACTCAACCTCAAGGGTAAT 1691856 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || |||||||| || |||| ||||| Sbjct 1691857 GGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 1691892 Score = 122 bits (134), Expect = 2e-22 Identities = 153/209 (73%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| ||||||||||||||||| ||||| | || || | |||||||| | Sbjct 1691002 CAAG-TGAAGAGTTGACTCTTTTTGGATGTTATAATCTGACAATGTGCGACCATCTTCCA 1691060 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 ||| || || || || | | ||||||||| | | ||| ||||| || || |||| Sbjct 1691061 ATTGTTTACCAGCAAAAATTAAACGCTGCTGGTCTGGAGGGATGCCTTCTTTGTCCTGAA 1691120 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| ||| ||| | || | |||| || || ||||||||||| |||||||| | Sbjct 1691121 TTTTAGCTTTCACATTTTCAATTGTGTCAGATGCTTCGACTTCAAGAGTTATAGTTTTTC 1691180 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | ||||| ||||| || || | |||||| Sbjct 1691181 CAGTGAGGGTCTTGACAAAAATTTGCATT 1691209 Score = 114 bits (126), Expect = 3e-20 Identities = 159/221 (72%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 |||||| ||||| || || || || || || || ||||| ||||| | || || | || Sbjct 1691905 TCTGAGTACAAGGTGGAGTGTGGATTCCTTCTGAATGTTATAATCAGACAAGGTGCGTCC 1691964 Query 151949 ATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||| || ||||| || || ||||| | ||||||||||| | | ||| || || Sbjct 1691965 ATCTTCGAGCTGCTTT--CCTGCAAAGATCAATCTCTGCTGGTCTGGGGGGATGCCCTCT 1692022 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || |||||||| ||| || ||| | || | | |||| || ||| || || | || Sbjct 1692023 TTGTCTTGAATCTTTGCCTTAACATTTTCAATGGTGTCGGATGCCTCGACCTCCAATGTG 1692082 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || ||||| || || || |||||||| |||| ||||||||| Sbjct 1692083 ATGGTTTTACCAGTCAGCGTCTTCACAAAGATCTGCATTTT 1692123 Score = 96.9 bits (106), Expect = 8e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961 ||||| ||||||||||||||||| ||||| || | || ||| | ||||| || || Sbjct 1689616 TGAAGTGTAGACTCTTTTTGGATATTGTAGTCTGATAGAGTACGACCATCCTCAAGTTGC 1689675 Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || || || || || | | ||||||||| | | ||| |||||||| || || || || Sbjct 1689676 TTGCCAGCAAAAATCAAACGCTGCTGGTCTGGAGGGATACCTTCCTTGTCCTGGATCTTG 1689735 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 ||| ||| |||| | | | || ||| || || || | || || || || || || Sbjct 1689736 GCTTTTACATTCTCAATGGTATCAGAAGCTTCAACCTCCAATGTGATGGTCTTACCAGTA 1689795 Query 152082 AGAGTCTTCACGAAGACCTGCAT 152104 |||||||| || || | |||||| Sbjct 1689796 AGAGTCTTAACAAAAATCTGCAT 1689818 Score = 96.9 bits (106), Expect = 8e-15 Identities = 147/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| ||||| || ||||||||||| || | | || | |||||||| | Sbjct 1689840 CAAG-TGAAGAGTCGACTCCTTCTGGATGTTGTAGTCAGACAGTGTGCGTCCATCTTCCA 1689898 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| || || |||||||| | |||||| || | | || ||||| || ||||||| Sbjct 1689899 GCTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGAATGCCTTCTTTGTCTTGAA 1689958 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | |||| ||| || ||||| | || || || || | Sbjct 1689959 TCTTGGCCTTGACATTTTCAATAGTGTCGGAAGCTTCCACTTCCAAGGTGATGGTCTTTC 1690018 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | ||||| || |||| |||||| Sbjct 1690019 CTGTCAATGTCTTGACAAAGATCTGCAT 1690046 Score = 84.2 bits (92), Expect = 5e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| || || ||||| ||||| || ||||| || | ||||| | || ||||| || Sbjct 1691461 ATGCAGTGTCGACTCCTTTTGAATATTGTAGTCTGACAAAGTGCGACCGTCTTCAAGCTG 1691520 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| |||||||| || || | ||| || || | | |||||||| || ||||||||||| Sbjct 1691521 TTTTCCGGCGAAAATGAGACGCTGTTGATCTGGGGGAATTCCTTCTTTGTCTTGAATTTT 1691580 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 || || | || | |||| || || || ||||| || || ||||| || || Sbjct 1691581 GGCCTTCACGTTTTCAATTGTGTCGGAGGCTTCGACCTCAAGTGTGATGGTTTTACCTGT 1691640 Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || || | ||||| Sbjct 1691641 CAGAGTTTTGACAAAAATTTGCAT 1691664 >seq256 Length=3517054 Score = 131 bits (144), Expect = 4e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | |||||| ||||| || || || || |||||||||| || || | |||||| Sbjct 130800 AGGACTAAATGAAGGGTAGATTCCTTCTGAATATTGTAATCGGACAATGTACGTCCATCT 130859 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | ||| ||||||||||| | || |||||||| | | ||||||||||| ||| Sbjct 130860 TCCAATTGTTTTCCGGCGAAGATCAATCTTTGCTGGTCTGGAGGAATTCCTTCCTTATCT 130919 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || ||||| |||||| | || | |||||| | || || ||||| || || ||| Sbjct 130920 TGGATTTTGGCCTTGACATTTTCAATGCTGTCAGCCGCATCAACCTCAAGGGTGATGGTT 130979 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || ||||| || ||||| |||| |||||||| Sbjct 130980 TTTCCTGTGAGTGTTTTCACAAAGATTTGCATTTT 131014 >seq336 Length=3726090 Score = 100 bits (110), Expect = 7e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 151915 CTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGA 151974 ||||||||||||||||||| | ||| | |||||||||| ||| || || |||| Sbjct 1528380 CTTTTTGGATGTTGTAATCTTGGAGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAGA 1528439 Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034 | | || ||||| |||| | ||||||||||| ||||| ||||| |||||| | | Sbjct 1528440 TCAATCTTTGCTGATCCGGAGGAATTCCTTCCTTATCTTGGATTTTGGCCTTGACATTTT 1528499 Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 | | | || || || || || | ||||||||||| || || | ||| || || | Sbjct 1528500 CAATAGTATCAGAGGCTTCGACCTCCAAGGTAATAGTTTTACCAGTCAAAGTTTTGACAA 1528559 Query 152095 AGACCTGCATTTT 152107 ||| ||||||||| Sbjct 1528560 AGATCTGCATTTT 1528572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153815522351547