Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq34 185 9e-42 >seq34 Length=2688268 Score = 185 bits (204), Expect = 9e-42 Identities = 383/565 (68%), Gaps = 10/565 (2%) Strand=Plus/Plus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 ||||| | | ||| | |||||| || || | |||||||||||| ||||| || || Sbjct 1149188 TCATCGCGAGAAATTAGTTCATTGCTGAAAGTAAGTCCTGGCATTAAACCTCGCTTCTTC 1149247 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 | ||||||||| |||||||| || |||||||| || |||||||| ||||| || Sbjct 1149248 AACCAAAATATGGCAGCAAAACTACCACTGAAGAAAATTCCTTCAACAGCTGCAAAAGCT 1149307 Query 23653 ACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCC 23712 | || || | ||||||| ||| | | || | ||||| || | | ||| ||||| Sbjct 1149308 ATAACTCGCTCAGCAAATGTAGCACTCTTATGACTGATCCAGTTCATAGCCCAGTTAGCT 1149367 Query 23713 TTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATT- 23771 ||| | ||||| | ||||||||||| || || | | ||| | || Sbjct 1149368 TTCTTGGTAACACAAGGTAGAGTTTCAATTGCATTGAACA-AGTAGTCCCTCTGAGATGG 1149426 Query 23772 ATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGC 23831 ||| || || || |||||||| || | ||||||||| || || | |||||| || || Sbjct 1149427 ATCAGTAATGTAGGTATCAATAAGAAGTGAATACATTTCTGAGTGCACATTTTCCATGGC 1149486 Query 23832 AATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTT 23891 | || || ||||| || || | ||| |||| | |||||| || | |||| | Sbjct 1149487 TACTTGGAAGCCATAGAAGCAGCGAGCCTCAGTGACTTGAACTTCCTGGCTGAATCGCTC 1149546 Query 23892 AGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT 23951 | | | |||||| || ||||| |||||| ||||||||||| || | |||| || Sbjct 1149547 AACGAGATTTTCATTGACAATGCCATCAGAGGCAGCAAAGAATGCTAATACATGAGAAAT 1149606 Query 23952 AAAATGTCTTTCATCAGTTG--AT--AATTTTTTCCAATCATTAATATCTTTTGATAAAT 24007 ||||||| | || |||| || || ||| |||||| | ||||| |||||||| | Sbjct 1149607 AAAATGTTTCTC----GTTGTCATTCAACTTTGCCCAATCGTGCATATCCTTTGATAAGT 1149662 Query 24008 CAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCAT 24067 | ||||| || || |||||||| ||| || ||| ||||| ||||||||||| Sbjct 1149663 CTACTTCTTCGACCGTCCAAAATGAAGCCTCAGCTTTCTTGTACATGTGCCAAATATCAG 1149722 Query 24068 TATGTTGTATTGGAAATATTACGAA 24092 ||| || ||||| || ||||| Sbjct 1149723 GCCATTGAATGGGAAAGATCACGAA 1149747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521485672859800