Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq89 129 4e-25 seq256 87.8 1e-12 >seq89 Length=3244750 Score = 129 bits (142), Expect = 4e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | || |||| |||||| || |||||| ||||||||||| || Sbjct 1689816 CATACCACCACGCAGACGCAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTC 1689875 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| ||| | || |||||||| || || |||||||| | |||||||||||||| Sbjct 1689876 AGACAGTGTGCGTCCATCTTCCAGCTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGG 1689935 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | ||||| || || ||||| ||| | || | || ||||||| | ||| Sbjct 1689936 AGGAATGCCTTCTTTGTCTTGAATCTTGGCCTTGACATTTTCAATAGTGTCGGAAGCTTC 1689995 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| |||| || || |||||||| || | ||||| || ||||| ||||| Sbjct 1689996 CACTTCCAAGGTGATGGTCTTTCCTGTCAATGTCTTGACAAAGATCTGCAT 1690046 Score = 111 bits (122), Expect = 1e-19 Identities = 167/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| ||| | || ||||| || ||| ||||| || ||||| || Sbjct 1691887 TTGCATACCACCTCTCAATCTGAGTACAAGGTGGAGTGTGGATTCCTTCTGAATGTTATA 1691946 Query 44164 ATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 ||| | | || || || | || || |||||||| || ||||||||||| | |||||| | Sbjct 1691947 ATCAGACAAGGTG-CGTCCATCTTCGAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGGT 1692005 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGG 44282 ||| || | || || || || ||||| ||| | || | |||||||||| | Sbjct 1692006 CTGGGGGGATGCCCTCTTTGTCTTGAATCTTTGCCTTAACATTTTCAATGGTGTCGGATG 1692065 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||| || || || || || || || |||||||| ||||| ||||| Sbjct 1692066 CCTCGACCTCCAATGTGATGGTTTTACCAGTCAGCGTCTTCACAAAGATCTGCAT 1692120 Score = 107 bits (118), Expect = 1e-18 Identities = 170/241 (71%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 44098 TTTTTATTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGAT 44157 ||||| || | ||| || | || | || || | |||||| || ||| |||||||| Sbjct 1689579 TTTTTTTTACTGTCCACCCCGGAGACGTAATACTAAGTGAAGTGTAGACTCTTTTTGGAT 1689638 Query 44158 GTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTG 44217 ||||| || | || || | || || || ||||| || ||||| ||||||||||| Sbjct 1689639 ATTGTAGTCTGATAGAGTACGACCATCCTCAAGTTGCTTGCCAGCAAAAATCAAACGCTG 1689698 Query 44218 CTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGT 44276 ||| |||| ||| | ||||||||| ||| ||||| |||| | ||| | ||||| | Sbjct 1689699 CTGGTCTGGAGGGATACCTTCCTTGTCCTGGATCTT-GGCTTTTACATTCTCAATGGTAT 1689757 Query 44277 CGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCA 44336 | | | ||| ||||||| || || ||||| || || || ||||| || || || |||| Sbjct 1689758 CAGAAGCTTCAACCTCCAATGTGATGGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCA 1689817 Query 44337 T 44337 | Sbjct 1689818 T 1689818 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| || ||| ||||||||||| ||||| | | | ||| | || ||| Sbjct 1691000 ACCAAGTGAAGAGTTGACTCTTTTTGGATGTTATAATCTGACAATGTGCGACCATCTTCC 1691059 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | || || || ||||| || ||||||||||| |||| ||| | ||||| || ||| Sbjct 1691060 AATTGTTTACCAGCAAAAATTAAACGCTGCTGGTCTGGAGGGATGCCTTCTTTGTCCTGA 1691119 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 || || |||| || | || ||||| | | ||| || || | || || || ||| Sbjct 1691120 ATTTTAGCTTTCACATTTTCAATTGTGTCAGATGCTTCGACTTCAAGAGTTATAGTTTTT 1691179 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||||||| || || |||||||| Sbjct 1691180 CCAGTGAGGGTCTTGACAAAAATTTGCAT 1691208 Score = 96.9 bits (106), Expect = 2e-15 Identities = 164/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| ||| | || || || || ||| || || || |||||||| Sbjct 1691659 TTGCATACCTCCTCTCAATCTGAGTACAAGATGCAGTGTGGATTCTTTCTGAATGTTGTA 1691718 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | || ||| | || |||| || || || ||||||||||| | ||||||||| Sbjct 1691719 ATCTGACAGAGTGCGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTCTGCTGATC 1691778 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282 || || | || ||||| | | | | || || | || ||| | || || || | | Sbjct 1691779 TGGTGGAATTCCCTCCTTAT-CTTGAATTTTGGCCTTAACATTCTCAATAGTATCTGAAG 1691837 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || ||||| | ||||| ||||| || || || ||||| || ||||||||||| Sbjct 1691838 ACTCAACCTCAAGGGTAATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 1691892 Score = 95.1 bits (104), Expect = 9e-15 Identities = 162/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| || | ||| | | |||| ||| || ||| ||| ||||| || || || Sbjct 1691203 TTGCATTCCACCACGCAGACGGAGTACCAAGTGGAGGGTGGACTCTTTTTGAATATTATA 1691262 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | | | ||| | || |||| |||||| || ||||| || |||||||||||||| Sbjct 1691263 GTCCGACAATGTGCGACCATCTTCCAACTGCTTACCAGCAAAAATTAAACGCTGCTGATC 1691322 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || || | ||||| || || ||||| ||| | || | || ||||| | || Sbjct 1691323 TGGTGGGATTCCTTCTTTGTCTTGGATCTTGGCCTTGACATTTTCAATTGTGTCTGAGGC 1691382 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || |||| ||||| || || || || | || || || |||||||||||| Sbjct 1691383 CTCGACTTCCAAAGTAATGGTTTTACCAGTCAATGTTTTAACAAAGATTTGCATG 1691437 >seq256 Length=3517054 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 ||||| || || |||||||||| | | || | || |||| || || ||||| ||| Sbjct 130821 TCCTTCTGAATATTGTAATCGGACAATGTACGTCCATCTTCCAATTGTTTTCCGGCGAAG 130880 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 ||||| | ||||| |||| ||| | |||||||| || || || ||| | || Sbjct 130881 ATCAATCTTTGCTGGTCTGGAGGAATTCCTTCCTTATCTTGGATTTTGGCCTTGACATTT 130940 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | ||| |||| || | || ||||| | || || || ||||| ||||| || ||||| Sbjct 130941 TCAATGCTGTCAGCCGCATCAACCTCAAGGGTGATGGTTTTTCCTGTGAGTGTTTTCACA 131000 Query 44327 AAGATTTGCAT 44337 ||||||||||| Sbjct 131001 AAGATTTGCAT 131011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359988833704269