Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichogramma_20pretiosum_20[refseq_20GCF_5F000599845.1_202014-03-24] 357 sequences; 195,087,592 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq303 86.0 8e-12 seq211 86.0 8e-12 >seq303 Length=5426051 Score = 86.0 bits (94), Expect = 8e-12 Identities = 113/157 (72%), Gaps = 5/157 (3%) Strand=Plus/Plus Query 155904 AATCCAATTTC-----TATCTTCAATTCCAACCGCCCAGGTCTTAATAATGCTTCGTCAA 155958 |||| |||||| |||| | | ||||| || ||||||| | ||| || ||||||| Sbjct 4376276 AATCGAATTTCATAAGTATCCTTACCTCCAATCGACCAGGTCGGAGTAAAGCCTCGTCAA 4376335 Query 155959 TTAAGTCGGGTCTGTTGGTCATACCTATGATTAAAATGTTGTTTAAAGATTCTACACCGT 156018 | | ||| |||||||||||||||| |||| | ||| || || || ||| || || | Sbjct 4376336 TCATGTCACGTCTGTTGGTCATACCAATGACGAGAATATTATTCAACTGTTCAACGCCAT 4376395 Query 156019 CTATTTTAGACAATAATTGATTGACTACGGCGTCGTG 156055 | ||||| | | || ||||||||||| | ||||| Sbjct 4376396 CAATTTTGGCTAGCAACTGATTGACTACAGTATCGTG 4376432 >seq211 Length=1509898 Score = 86.0 bits (94), Expect = 8e-12 Identities = 152/222 (68%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 50300 ATTCCCTCTATTTACGACTaaaaaaaTGTTTTGGCGCGGAATAGCGGAAGAACTTTTATG 50359 ||| ||||| || ||||| || | | | |||||||||||| | | |||||||| | || Sbjct 52687 ATTTCCTCTTTTAACGACAAAGAGAGTATTTTGGCGCGGAGTGGTCGAAGAACTACTTTG 52746 Query 50360 GTTCCTCGACGGATCTACAAATTCTTTAAAGTTATCGGAGAAGTCCGTTCGTATATGGGA 50419 ||| | | || || || ||| | | | ||||| || || ||| |||||||| Sbjct 52747 GTTTATTAAGGGTTCAACGAATGCCAAAGAATTATCTGATAAAGATATTCACATATGGGA 52806 Query 50420 CGCTCACGGTTCCAGATCAAATTTAGATCGTTTAGGATTTAATTACAGAAACAAAGGAGA 50479 ||| | | || || | ||||||| | || |||| | ||| | || || Sbjct 52807 TGCTAATAGCTCGCGAGAATTTTTAGATTCCTGTGGTTTTACGGATAGAGAAGTTGGCGA 52866 Query 50480 TTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGC 50521 ||||||||| ||||| || ||||| ||||| ||||||||||| Sbjct 52867 TTTAGGACCGGTTTATGGATTTCAGTGGAGGCATTTTGGAGC 52908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667072223176920