Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq13914 149 7e-31
seq7792 141 1e-28
seq59517 129 7e-25
seq19381 114 2e-20
>seq13914
Length=11729
Score = 149 bits (164), Expect = 7e-31
Identities = 166/221 (75%), Gaps = 3/221 (1%)
Strand=Plus/Plus
Query 24159 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 24218
|||||||| |||||||| ||| || || ||||| ||||||||||| | ||||||
Sbjct 7888 TCGTCTCTTGATATTAATTCATTGCTGAAAGTCAGTCCAGGCATTAGGCCCCTTTTTTTA 7947
Query 24219 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCA 24278
||||||||||| | ||||| ||||||||||||||| ||||| || || ||||| ||
Sbjct 7948 AGCCAAAATATCGCAGCAAAACTTCCAGAAAAGAAAATACCTTCGACAGCAGCAAAAGCT 8007
Query 24279 ATAAGTCTTTCTCCATAACCGGCG---CTGTCATGTATCCACTTTTGAGCCCAATCGGCC 24335
|| | |||||||||| || ||| |||||| ||||||||| ||||| || ||
Sbjct 8008 ATGATTCTTTCTCCAAAAGTCGCGTTTTTGTCATTTATCCACTTCAACGCCCAGTCAGCT 8067
Query 24336 TTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 24376
|| | || ||||| ||||| || || || ||||| || ||
Sbjct 8068 TTTCTCTTAACACACGGCATGGTTTCAATGGCATTGAATAG 8108
Score = 131 bits (144), Expect = 2e-25
Identities = 164/225 (73%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 24395 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 24454
|||||||| || || |||||||| | || |||||||| ||||| | || ||||| |
Sbjct 8198 ATCTTTAATGTAAGTGTCAATCAACAAGCTGTACATTTCTGAATGTACATTCTCAATTGT 8257
Query 24455 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTC 24514
|||||||||||||| ||| |||| || || | ||| ||||||||| |||| || ||
Sbjct 8258 GATTTGAAATCCGTAAAAAAATCTGGCTTCAGGAATTTGTACTTCTTGGAAAAAACGCTC 8317
Query 24515 TGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 24574
||||||||||||| || || || ||| ||| || ||||| || || || || ||
Sbjct 8318 GACTAAATTTTCATTAACGATACCATCAGAGGCAGCGAAAAATGCTAAAACGTGGGAAAT 8377
Query 24575 AAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATC 24619
|| | || || || ||| | ||||| | |||||| ||| |||
Sbjct 8378 GAATTTCTTCTCTTCGGGTTTCAGTTTTTCCCAATCTCTGAAATC 8422
Score = 89.7 bits (98), Expect = 6e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23963 CAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 24022
||||||||| || ||||| || ||||| |||||||| | ||||| |||||||| || |
Sbjct 7615 CAATCTATCAGCTACAAATTCAATATACGTTTTCATTAATTCACTGTTCATTCCAATCAT 7674
Query 24023 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 24082
|| || | ||| |||| | ||||||||||||||| || ||||| |||||
Sbjct 7675 CGATACGGGCAAAGCATCAGTCAAAAATTCTTGTTCAATGATAACGGCGTCACGAATAAT 7734
Query 24083 AGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAA 24142
| | | ||| |||| ||| | | |||||||| |||||||| || || ||
Sbjct 7735 TTCGGTGATTTCTTCAACACTGGGTTTTTGAACCAAATGTTTGAACATCAAGCAAGCAAA 7794
Query 24143 ATCGCAGTGTAGACCCT 24159
|||| |||| |||||
Sbjct 7795 ATCGGTATGTAAACCCT 7811
>seq7792
Length=27931
Score = 141 bits (156), Expect = 1e-28
Identities = 157/209 (75%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 24171 ATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATG 24230
||||||||||| || || | ||| ||||||||||| ||||||||||||||||||||
Sbjct 19189 ATTAATTCGTTACTGAAAGTCAATCCAGGCATTAGGCCTCGCTTTTTAAGCCAAAATATT 19248
Query 24231 GACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCT 24290
| ||||| ||| |||||||| || ||||| || || ||||| || || | ||||||
Sbjct 19249 GCAGCAAAACTTCCTGAAAAGAAGATGCCTTCGACGGCAGCAAACGCTATGATCCTTTCT 19308
Query 24291 CCATAACCGGC---GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACA 24347
||| || || | ||| |||||| || ||||| || || ||||| || |||
Sbjct 19309 CCAAAAGTAGCATTTTTATCAGCTATCCATTTCAACGCCCAGTCTGCTTTCTTCTTAACA 19368
Query 24348 CAAGGCATTGTCTCTATAGCATTAAAGAG 24376
||||||||||| || |||||||| || ||
Sbjct 19369 CAAGGCATTGTTTCAATAGCATTGAACAG 19397
Score = 129 bits (142), Expect = 7e-25
Identities = 169/234 (72%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 24386 TTCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTT 24445
|||| || ||| || || ||||| || ||||| | ||| |||||||| ||||||| ||
Sbjct 19476 TTCAGTAGGATCCTTGACGTATGTGTCTATCAATAAACTGTACATTTCTGAATGAACATT 19535
Query 24446 TTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACA 24505
|| |||| || |||||||||||||| ||||||| |||| || || |||||| | |
Sbjct 19536 CTCTATGGTGATCTGAAATCCGTAGAAGAATCTAGCTTCGGGGATTTGAACTTCTTGAAA 19595
Query 24506 AAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATAC 24565
|| || || |||||||||||||||| || |||||| || || ||||| || | ||
Sbjct 19596 GAAGCGCTCGACTAAATTTTCATTCACGATACCGTCAGATGCGGCGAAAAATGCAAGAAC 19655
Query 24566 ATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATC 24619
|| || || | || || || ||| | ||||| | ||| || ||| |||
Sbjct 19656 GTGCGAAATGAACTTCTTCTCTTCGGGTTTCAGTTTCTCCCAGTCTCTGAAATC 19709
Score = 82.4 bits (90), Expect = 9e-11
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 24633 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGA 24692
|||||||| ||||||||||||| || |||||||||||| |||| ||| || ||||
Sbjct 19791 ACTTCTTCAGCTGTCCAAAATGAAGCTTCTGCCTTTTTAAACATGGCCCAAATATCATCG 19850
Query 24693 TATTGAATTGGAAAAATAACAAATCTATTTGGATT 24727
|||| |||||| | || ||||||||| |||||
Sbjct 19851 TATTTAATTGGCATTATTACAAATCTACGAGGATT 19885
>seq59517
Length=19559
Score = 129 bits (142), Expect = 7e-25
Identities = 140/186 (75%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 53149 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 53208
||| ||||||||||||||||| |||| | ||| || || || ||||| ||||| |
Sbjct 14730 TACCTGAAATTCTCCAGACAAGACTCGTCTAGTATACATGTTTGAAGTATAAGGTTCGAA 14671
Query 53209 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 53268
||| ||||||||||| |||||||||||||| || || || |||||||| || | | ||
Sbjct 14670 AGATTCATTATTTCCTAAAATTTGAGCAGTGGAAGCGGTAGGCATAGGAGCAAGAAGTAG 14611
Query 53269 ACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATC 53328
| |||||||| |||||| | | ||||| ||||||| | | ||||| ||| | |||
Sbjct 14610 AGAATTTCTAACGCCGTATTGTTTAATTTTTTCTTTTAACGATGTCCAATCCCATAAATC 14551
Query 53329 CGACGG 53334
|| ||
Sbjct 14550 AGATGG 14545
Score = 93.3 bits (102), Expect = 5e-14
Identities = 126/176 (72%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 54431 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 54490
||| | || | |||||| |||||||| || || || | || || | | || || ||
Sbjct 13019 GCACTGAAAAGGGTAGGCGAAGCGTGAGTGAAATATCTCTCCGATAACAAGTTATAAGTT 12960
Query 54491 TCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 54550
|| || |||| ||| ||||| |||||||||||| || || ||||| ||||| ||
Sbjct 12959 TCAATCGCTGCGTCGATATCTTCAGCATGAATTCCTACAGCAACTCGCATCAACATATGT 12900
Query 54551 TGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGT 54606
|| || | ||| || | || ||||||||||| || || ||||||||||||||
Sbjct 12899 TGTGGGCGTTCTACAACTTTTCCGTTTATTTTCAATAAATACGATTTTTCCAAAGT 12844
Score = 87.8 bits (96), Expect = 2e-12
Identities = 123/170 (72%), Gaps = 2/170 (1%)
Strand=Plus/Minus
Query 52875 TCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 52934
|||| ||||| |||||||| || | | ||||| | |||| || || || ||||
Sbjct 15144 TCCAGCCGTAGAAATGCATCGAAGTCAAAGTCGAATAGTTTGGATTCGCCATGTGTATAT 15085
Query 52935 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 52994
| | | ||| |||||| ||||| ||||| | || ||||||||||| | || || |
Sbjct 15084 TTAAACTTTGCGATTGATCAATGAAAGCTCCACGATCGGCAGCCATTTTCAAGACGGTTT 15025
Query 52995 TTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGG 53043
||||| ||||||||| | ||||||||| | ||| ||| | ||| |||||
Sbjct 15024 TTTGTTTAATTTCCCATACAGTTTTATACAGCTC-CTTCAAATCATCTGG 14976
Score = 86.0 bits (94), Expect = 7e-12
Identities = 109/150 (73%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 53731 TACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGT 53790
|||||||| || | | ||||| | || ||||| || | |||||||| || || ||
Sbjct 13922 TACCTCATCAGGAGCACTATATTCGACGATTTCAGTACACAAATTACTACTTTTAATAGT 13863
Query 53791 TCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGT 53850
|||||||||||| ||||| ||| | ||||| ||||| || || | ||| | || ||
Sbjct 13862 TCCTAAATTTTGATGATTGGATTTTCTATTACAGGCATCTTTGTACAACATGTAAGGTGT 13803
Query 53851 ACCAGTTTCAATCTGGGATTCTATAATCGC 53880
|| |||||||| || || |||| ||| ||
Sbjct 13802 TCCTGTTTCAATTTGAGAGTCTAAAATTGC 13773
>seq19381
Length=19756
Score = 114 bits (126), Expect = 2e-20
Identities = 138/186 (74%), Gaps = 4/186 (2%)
Strand=Plus/Minus
Query 54429 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG--AAAGTAGATTGTA 54486
||||||| ||||||||||||||||| || ||||| || |||||| | | || ||| ||
Sbjct 8694 CCGCATTGAATAAGGTAGGAGAAGCATGAGTAAA--ATATTTCAGGGACATTAAATTATA 8637
Query 54487 CGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACAT 54546
|| || ||| | ||||| ||||| ||||| || || || || ||||| |||||
Sbjct 8636 GGTTTCAATAACAGAGTCGATATCTTCGCCGTGAATACCAACGGCAACTCGCATCAACAT 8577
Query 54547 GTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGT 54606
|||||| || | ||| || || ||||| ||||||| | ||||||||||||| |||
Sbjct 8576 GTGCTGTGGACGTTCGACAATACGATTGTTGATTTTCAATAGATAGGATTTTTCCAGAGT 8517
Query 54607 TTTAAA 54612
| |||
Sbjct 8516 CTGAAA 8511
Score = 109 bits (120), Expect = 7e-19
Identities = 204/300 (68%), Gaps = 0/300 (0%)
Strand=Plus/Minus
Query 53977 CAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 54036
|||||| ||||||| | ||||||||||| ||| | | | || | | || | | |
Sbjct 9211 CAATCCGGGACATTGACTGGGACACATCAAACTCCATTTTTCATCTTTTTCGACCCTTCT 9152
Query 54037 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTT 54096
||| || || || ||||| | || ||||| ||| || | | | || || ||
Sbjct 9151 CATGAATTCGTCGGGGATCCACATTGCGTAAAATAAATCCCTAGCGCGAGACTCTTCTTT 9092
Query 54097 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 54156
|| | ||| ||| || || | || | | |||||| | |||||| |||||||||||
Sbjct 9091 ACCAGAATTTTTTCGCAGCTCTAAAAATTCAAAAATATCCGCATGCCAAGGTTCCAAGTA 9032
Query 54157 TATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 54216
|| | | | | || || | |||||| ||||| || || | |||||| || ||||||||
Sbjct 9031 AATAGCAAAAGCACCCGGTCTTTTGTTGCCTCCTTGGTCCACGTATCTGGCTGTGTTATT 8972
Query 54217 ATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCT 54276
|| || | | ||| ||||| | |||||| ||| | || || || || | |||||||||
Sbjct 8971 GTATACGCGAAGCATCGGAATTAGACCATTTGATACGCCGTTTGTTCCAGCGATATAGCT 8912
Score = 91.5 bits (100), Expect = 2e-13
Identities = 140/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 53366 CCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCA 53425
|| |||||| | ||| ||| | || || | ||||| || | || | ||| |||||
Sbjct 10026 CCTTTACTGACTGGCGAACCTTCGTAGGTTTTATATGGACCGTATTTTTGAGCAAGTTCG 9967
Query 53426 CAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGT 53485
|| ||||| ||||||||||||||||| | |||||| || |||| ||| || |||
Sbjct 9966 CAGCTCGCTTCTAATGCACCGTAATACAAGGTTTCAAAAATCTGTACATTAAGTAATTGC 9907
Query 53486 GCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACA 53545
| | ||| ||||||||| | | | ||||| ||| ||||||||||||| |
Sbjct 9906 GACTGTTCGCTTTCAAATGGAAGTCTCATCAAGATAAATAGGTCGGCTAATCCTTGAATA 9847
Query 53546 CCAATACCGATAGGTCTATG 53565
|| || || || ||||||||
Sbjct 9846 CCTATTCCAATCGGTCTATG 9827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593125013693280
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