Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_001901.1
Length=46375
Score E
Sequences producing significant alignments: (Bits) Value
seq69273 293 7e-75
>seq69273
Length=3889
Score = 293 bits (324), Expect = 7e-75
Identities = 239/290 (82%), Gaps = 0/290 (0%)
Strand=Plus/Minus
Query 2097 GTTTATCTGACTGAGGTGGGTACTGATACCGCTAAAGAGCAGATTTATAACCGCTTCACG 2156
||||| || || || | ||||| |||||||| ||||||||||||||||||||||||||
Sbjct 779 GTTTACCTTACCGAAATCGGTACGGATACCGCGAAAGAGCAGATTTATAACCGCTTCACA 720
Query 2157 CTGATTGTCGAGGGAGATGAACCTCTGGCCGGTGCCGTTCACTTCCCCAACAACCCCGAT 2216
|||| || || |||||||| || ||||||||||||||||||| || ||||| |||
Sbjct 719 CTGACGCCGGAAGGGGATGAACCGCTTCCCGGTGCCGTTCACTTCCCGAATAACCCGGAT 660
Query 2217 ATTTACGATCTTTCTGAGGCGCAGCAGCTGACCGCCGAAGAGCTGGTAGAAAAGTGGGTT 2276
|||| ||||| | || |||||||||||||| || ||||||| ||| ||||| |||||
Sbjct 659 ATTTTTGATCTGACCGAAGCGCAGCAGCTGACTGCTGAAGAGCAGGTCGAAAAATGGGTG 600
Query 2277 GATGGGAAGAGAAAAATCATATGGGACAGCAAAAAGAGGCGAAATGAGGCTCTCGACTGC 2336
||||| | || |||||| | ||||||||||||||| | || |||||||| |||||||||
Sbjct 599 GATGGCAGGAAAAAAATACTGTGGGACAGCAAAAAGCGACGCAATGAGGCACTCGACTGC 540
Query 2337 TTTGTTTACGCACTGGCGGCGCTTCGTATCAGCATATCCCGCTGGCAGCT 2386
|| ||||| || ||||||||||| || ||||| || ||||||||||||||
Sbjct 539 TTCGTTTATGCGCTGGCGGCGCTGCGCATCAGTATTTCCCGCTGGCAGCT 490
Score = 127 bits (140), Expect = 6e-25
Identities = 123/158 (78%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 12503 tttGCAGGTGGCGGTTATACCGGTTCAGGCGGGAAATATGAACCTGCAGGTGTCGTTCAC 12562
|||||| || || | ||| || | ||||| |||||||| || || || | ||||||
Sbjct 3815 TTTGCAACCGGAGGATTTACGGGAACCGGCGGCAAATATGAGCCAGCGGGGATTGTTCAC 3756
Query 12563 CGTGGTGAATTTGTTTTCACCAAAGAGGCTACAAACCGGATCGGCGTCGGCAATCTTTAC 12622
|||||||| ||||| ||||| || ||||| || | |||||| ||||| || |||||||||
Sbjct 3755 CGTGGTGAGTTTGTCTTCACGAAGGAGGCAACCAGCCGGATTGGCGTGGGGAATCTTTAC 3696
Query 12623 CGGATGATGAAAGGGTATGCCACGGGTGGGTATGTCGG 12660
||| ||||| || |||||||| || || ||||||||
Sbjct 3695 CGGCTGATGCGCGGCTATGCCACCGGCGGTTATGTCGG 3658
Score = 123 bits (136), Expect = 7e-24
Identities = 124/161 (77%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 2711 TGGGACCTGACGGGAAAACATCCCTTCGGGAATACGCGGGATATCATGGAGGTGGTGGCG 2770
|||| || ||||| | ||||| || || ||||| || || ||||| || ||||| |||
Sbjct 3597 TGGGGCCGGACGGCATGACATCGCTGCGCGAATATGCCGGTTATCACGGCGGTGGCAGCG 3538
Query 2771 GGTTTGGTGGTCAGCTGCGAGGCTGGAATCCGCCGAGCGAAAGTGCAGATGCAGCACTCC 2830
| ||||| || ||| |||| ||||| || ||||| ||||||| |||||||| ||
Sbjct 3537 GATTTGGAGGGCAGTTGCGGTCGTGGAACCCACCGAGTGAAAGTGTGGATGCAGCCCTGT 3478
Query 2831 TTCCCAACTATTCTCGTGGAAATGCCCGCGCTGACGATCTG 2871
| ||||||| | | ||||| ||||||||||| |||||||||
Sbjct 3477 TGCCCAACTTTACCCGTGGCAATGCCCGCGCAGACGATCTG 3437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 148136855848884
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |