Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq54470 134 1e-26
>seq54470
Length=54847
Score = 134 bits (148), Expect = 1e-26
Identities = 240/345 (70%), Gaps = 4/345 (1%)
Strand=Plus/Plus
Query 97113 ATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCAC 97172
|| ||| ||||| |||||||| |||| | ||| || || || || || |||||||| ||
Sbjct 48372 ATTAGTAACATGTGCGATCATGTAAGTGAGTAGGGAGTAACTGGCGATATTAAAAGGTAC 48431
Query 97173 CCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACA- 97231
|||| |||||||| || || | |||||| | ||||| || | | |||| | |||
Sbjct 48432 TCCTAAACCCATATCGGCAGAACGTTGATACATTTGACACGATAATTCGCCATTA-ACAG 48490
Query 97232 CATAAAACTGACTCAATACA-TGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACA 97290
| |||||||| | | | ||| ||||| || || | ||||| || || | |||||| |
Sbjct 48491 CGTAAAACTG-CACTAAACAGTGACAAGGAGGTAGGGCCATCTTGGGTAAATCTAACGGA 48549
Query 97291 TTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATC 97350
|||||||| || | | |||||||||||| ||||| | | ||||||| ||| |
Sbjct 48550 TTCCAAGCGCATAAAATTATTCTTCTATCGTCGGGGTTATTTTTAATGGTATCAATGACA 48609
Query 97351 TGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCT 97410
| | | |||||| | ||||| |||| | | | | ||| || || |||
Sbjct 48610 TTTTGCAGTTGATCGATGCCTTTGTTGGAGTAATCGGCGTGCATATCTTTGTACTCAGCT 48669
Query 97411 CCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCT 97455
|| || || |||||||||||||| ||||| || || || || |||
Sbjct 48670 CCGAAGTGTCTCCATTGGAATCCGTAAACTGGACCGAGATCGCCT 48714
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346444254198020
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |