Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq50848 98.7 2e-15
>seq50848
Length=23004
Score = 98.7 bits (108), Expect = 2e-15
Identities = 139/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 189437 ACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCAT 189496
||||| || ||| ||||||| ||| | |||| || ||||| |||||| ||||||||
Sbjct 10385 ACTCACGACCCTTTATGGAATGCGGCTCAAAAACAAATGGTTGTAGAAGGCAAAATGCAC 10444
Query 189497 AGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGAC 189556
| ||||| ||||||||||||| ||||| ||| | |||||||| | || || || ||
Sbjct 10445 GGATTTTTGAGAATGTATTGGGCGAAGAAAATATTAGAATGGACGAAAAGTCCAGAGGAA 10504
Query 189557 GC-TTTGAGTTATAGTATCTATTTGAACAACAAGTACGAACTAGACGGCACGGATCCTAA 189615
|| || ||| | | | || ||||| ||| | || ||| | || || | ||||| ||
Sbjct 10505 GCGTTAGAGATCTCG-ATATATTTAAACGATAAATACAGTATGGATGGTAGAGATCCCAA 10563
Query 189616 CGGATACGTAGGT 189628
|| || || |||
Sbjct 10564 TGGCTATGTTGGT 10576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 922269148775440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |