Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_002371.2
Length=41724
Score E
Sequences producing significant alignments: (Bits) Value
seq9614 150 5e-32
seq19165 138 3e-28
>seq9614
Length=652
Score = 150 bits (166), Expect = 5e-32
Identities = 118/141 (84%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 36468 CGCATAGGGATTGCAGCAGTAGACGAAATCGAATCTGACCATAAGCGGCATCGCTGGACT 36527
||||| ||| | ||||||||||||||||||||| ||||||| || ||||||||||||
Sbjct 632 CGCATCGGGCAGGAAGCAGTAGACGAAATCGAATCAAACCATAACCGCCATCGCTGGACT 573
Query 36528 ACCGAAGAGTGCAAAGCGATTAAGGCGGAGTATCAGCAGAAGCTTAAAGACCTACGTGAC 36587
| |||||||||||| ||||| ||||| ||||| || ||||| || |||||||| || |
Sbjct 572 ATCGAAGAGTGCAAGGCGATCAAGGCAGAGTACCAACAGAAACTCAAAGACCTGCGAAAT 513
Query 36588 AGCAGAAGCGAGGCAGCATGA 36608
|||||||| ||||| ||||||
Sbjct 512 AGCAGAAGTGAGGCCGCATGA 492
Score = 93.3 bits (102), Expect = 1e-14
Identities = 68/79 (86%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 36818 GAGGCCGCATGACACACACTGTCAAAACCATTCCAGACATGCTCATAGAGACATATGGAA 36877
||||||||||||| | | || ||||||||||||||||||||| | || ||||| ||||
Sbjct 503 GAGGCCGCATGACGTTCTCAGTAAAAACCATTCCAGACATGCTCGTTGAAACATACGGAA 444
Query 36878 ACCAGACAGAAGTAGCACG 36896
| |||||||||||||||||
Sbjct 443 ATCAGACAGAAGTAGCACG 425
>seq19165
Length=1007
Score = 138 bits (152), Expect = 3e-28
Identities = 97/111 (87%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 25278 TTTTGCTGCTTCCAGCTCAACTCGCAGCTTCCCAACCGTAAGCGCAATATCCTCGTCCTC 25337
|||||||| ||| |||||||| ||||| ||||| || || |||||||||||||||| |||
Sbjct 431 TTTTGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTC 372
Query 25338 CTGGTCGCGGAGTTTGATGTATTGCTGTTTTTTATCCAGCTCATCCAGCAG 25388
|||||||||| |||||||||||||||| ||| | ||| | |||||||||||
Sbjct 371 CTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAG 321
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 133267863109752
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |